Query= MSMg01no289_n20.b1 MSMg01no289_n20.b1 CHROMAT_FILE:
MSMg01no289_n20.b1 PHD_FILE: MSMg01no289_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:16 2005
(321 letters)
>mm_chr10_105355306_105356026
Length = 721
Score = 598 bits (309), Expect = e-175
Identities = 315/317 (99%)
Strand = Plus / Minus
Query: 5 gaattctctctagaaattttagttaaaattgctatactggcagcactctgcttttaggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattctctctagaaattttagttaaaattgctatactggcagcactctgcttttaggtg 462
Query: 65 agtggggatttcacaccgcgcatgtgtggtagaagaacatggctaatacccaaaacatat 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agtggggatttcacacagcgcatgtgtggtagaagaacatggctaatacccaaaacatat 402
Query: 125 ttgtcttcataacctaagaaaatagtagtgcagatcaactatactaagccccaccagaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttgtcttcataacctaagaaaatagtagtgcagatcaactatactaagccccaccagaat 342
Query: 185 ttcacctgtaactcaacaagtgaagttcattattcacagaaatgaaagacaatacatatc 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttcacctgtaactccacaagtgaagttcattattcacagaaatgaaagacaatacatatc 282
Query: 245 tagaaatgtacaatatctaagtaaatggcagtaaggctgagattgcatcagccatcaaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tagaaatgtacaatatctaagtaaatggcagtaaggctgagattgcatcagccatcaaat 222
Query: 305 tgacatgttgaaaccat 321
|||||||||||||||||
Sbjct: 221 tgacatgttgaaaccat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_n20.g1 MSMg01no289_n20.g1 CHROMAT_FILE:
MSMg01no289_n20.g1 PHD_FILE: MSMg01no289_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:16 2005
(293 letters)
>mm_chr10_105184961_105185651
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 289/293 (98%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1 agcatttgaatatgtagcagcaccacaccaagccccaacatagaagactttagttatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatttgaatatgtagcagcaccacaccaagccccaacatagaagactttagttatcta 260
Query: 61 aattgattgtttctcaaaccattaagagattggatctttatatttcctgatattttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 aattgattgtttctcaaaccattaagagattggatctttatatttcctgatattttacgt 320
Query: 121 acaaataactactcaggaggttattaagatcttgttttcaactatcaacatcttcccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaataactactcaggaggttattaagatcttgttttcaactatcaacatcttcccaag 380
Query: 181 gtaaacagagtcaataaataactttcaacttccaagtgtcttttggataaaaaaaaaata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 gtaaacagagtcaataaataactttcaacttccaagtgtcttttggataaaaaaaa--ta 438
Query: 241 gaagctcctaattaataatacagaaaatgtaactcatggaaatgtatctggtg 293
||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 439 gaagctcctaattaataatacagaaaatgtaactcatgggaatgtatctggtg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 691
Length adjustment: 9
Effective length of query: 284
Effective length of database: 682
Effective search space: 193688
Effective search space used: 193688
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
