Query= MSMg01no290_e21.b1 MSMg01no290_e21.b1 CHROMAT_FILE:
MSMg01no290_e21.b1 PHD_FILE: MSMg01no290_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:48 2005
(653 letters)
>mm_chr10_119666813_119667867
Length = 1055
Score = 986 bits (510), Expect = 0.0
Identities = 604/654 (92%), Gaps = 34/654 (5%)
Strand = Plus / Minus
Query: 5 gaattcttctctctgcctgctgagg-aaaaaaagaagaggcacagactgtaaaaggaga- 62
||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 672 gaattcttctctcaggatgctgaggaaaaaaaagaagaggcacagactgtaaaaggagat 613
Query: 63 tatcctttaaaaaaaaccaaaaagccagaagccctccttttaccccacaagcctccacgc 122
|||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 612 tatcctttaaaaaaaaaaaaaaagccagaagccccccttttaccctacaagcctccacgc 553
Query: 123 tgatggacggctcctcctcacaccctgatgcttcctccacccccagtttccaccccagcg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgatggacggctcctcctcacaccctgatgcttcctccacccccagtttccaccccagcg 493
Query: 183 cctcgttgcaacgacaatgcaccagggatttgggaaaagggctagacaagcgtggaggga 242
||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 492 cctcgctgcagcgacaatgcaccaggtatttgggaaaagggctagacaagcgtggaggga 433
Query: 243 acaagggtgaaagcaaggcagcagaactcaagagaatgtaacaaacaacgcagaaatatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acaagggtgaaagcaaggcagcagaactcaagagaatgtaacaaacaacgcagaaatatc 373
Query: 303 tgatcacattacagaagctaacaacaccccaacaagatacgatagctatccactaagagc 362
|||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 tgatcaaattacagaagcaaacaacaccccgacaagatacgatagctatccactaagagc 313
Query: 363 aggaagttattcccgggaatagtcaaagttaaaaataaaagtttcggaatagaaaaacag 422
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggaagttattcaagggaatagtcaaagttaaaaataaaagtttcggaatagaaaaacag 253
Query: 423 aacagcatactaagatcctacatgataaaattaagaaaattagggggc---ataaaagcc 479
||||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 252 aacagtatactaagatcctacatgataaaattaagaaaattagggggctttat----gc- 198
Query: 480 agaaggaaagaaaagaacccactcaagagactcaaagatgcccagaatttataaagaatg 539
|||||||||||||||||||||||||||||||||||||
Sbjct: 197 -----------------------caagagactcaaagatgcccagaatttataaagaatg 161
Query: 540 tttacaatccacacagacagaaacaaccaaaccttaaaaacaggcagttccattgcagtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tttacaatccacacagacagaaacaaccaaaccttaaaaacaggcagttccattgcagtg 101
Query: 600 agatatttgaggcactgctaggtggctataaaatgtctggcaggtgcagagaag 653
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 100 agatatttgaggcactgctaggtggctat-aaatgtctggcaggtgcagagaag 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1055
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1045
Effective search space: 671935
Effective search space used: 671935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_e21.g1 MSMg01no290_e21.g1 CHROMAT_FILE:
MSMg01no290_e21.g1 PHD_FILE: MSMg01no290_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:49 2005
(276 letters)
>mm_chr10_119494331_119495007
Length = 677
Score = 505 bits (261), Expect = e-147
Identities = 273/277 (98%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 1 ctatctacttaaatctaacagatggcagcaggtaggccagttggcacatttgtgcatcag 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ctatctacttaaatctaacagatggcagcgggtaggccagttggcacatttgtgcatcag 260
Query: 61 tgtgtaaattggtggctcatgagatcactggcacaaatgggtcgccatggcctgataaat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tgtgtaaattggtggctcatgagatcactggcacaaatgggtcaccatggcctgataaat 320
Query: 121 atcactgttttttttt-ccccaatcatttcagtcatttcatctaaatatggttctaagta 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcactgttttttttttccccaatcatttcagtcatttcatctaaatatggttctaagta 380
Query: 180 catttcttctgtagctttactgtcttccaaaccgatccccaataaaatgaggctcccaga 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 catttcttctgtagctttactgtcttccaaactgatccccaataaaatgaggctcccaga 440
Query: 240 aactaagtggtgctcaaagagtaaagctttggagttc 276
|||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactaagtggtgctcaaagagtaaagctttggagttc 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 677
Length adjustment: 9
Effective length of query: 267
Effective length of database: 668
Effective search space: 178356
Effective search space used: 178356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
