Query= MSMg01no290_f02.b1 MSMg01no290_f02.b1 CHROMAT_FILE:
MSMg01no290_f02.b1 PHD_FILE: MSMg01no290_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:50 2005
(319 letters)
>mm_chr10_61210191_61210909
Length = 719
Score = 571 bits (295), Expect = e-167
Identities = 310/315 (98%)
Strand = Plus / Minus
Query: 5 gaattcaaggccaatctcagctccctgaggccctttctcaaaacaaaagaaatcactggt 64
||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 519 gaattcaaggccagcctaagctccctgaggccctttctcaaaacaaaagaaaccactggt 460
Query: 65 attttgagcccctgcgctgaccctcaacctggatggttgagaaaagcgatgctgaccgtt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 attttgagcccctgtgctgaccctcaacctggatggttgagaaaagcgatgctgaccgtt 400
Query: 125 acactgaaacgcttttcaatgaggaagttcatcttcttcctatcgtcaccatcttttctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 acactgaaacgcttttcaatgaggaagttcatcttcttcctatcgtcaccatcttttctt 340
Query: 185 cctaacgcagctatccctgacccagagtgacatcagccatattggctccatgagggtgga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctaacgcagctatccctgacccagagtgacatcagccatattggctccatgagggtgga 280
Query: 245 gggcatcgtccacccaaccacagccgagatcgacctcaaggaagagataggtaaggcctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gggcatcgtccacccaaccacagccgagatcgacctcaaggaagagataggtaaggcctg 220
Query: 305 gggggttggagaagt 319
|||||||||||||||
Sbjct: 219 gggggttggagaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_f02.g1 MSMg01no290_f02.g1 CHROMAT_FILE:
MSMg01no290_f02.g1 PHD_FILE: MSMg01no290_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:50 2005
(291 letters)
>mm_chr10_61035022_61035712
Length = 691
Score = 484 bits (250), Expect = e-141
Identities = 287/310 (92%), Gaps = 19/310 (6%)
Strand = Plus / Plus
Query: 1 cttccaagggttagggtttatttagtaaacttcagagatggcagaagacatgggagtaat 60
|||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||
Sbjct: 182 cttccaagggttagggtttaattagtaaacttcagagatggcagaggacgtgggagtaat 241
Query: 61 agaactgtcagcatgtatgacggaactcagggatgcccacttctgtggagtcctccttcc 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agaactgtcagcatgtatgacagaactcagggatgcccacttctgtggagtcctccttcc 301
Query: 121 actagggtgagcctctgtcaatgagaacagctcaaaccaatcagtgtg---a------ac 171
|||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 302 actagggtgagcctctgtcaatgagaacagctcaaaccaatcagtgtgtttatagatgac 361
Query: 172 cag----------cttgtgtgcacagttcccgtggccggtgacccgcaccgtgccagtga 221
||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagggcgagccagcttgtgtgcacagttcccgtggccggtgacccgcaccgtgccagtga 421
Query: 222 gggcaacccagactggctgctgttgggtcctaggcagtttcaatgacttatttagcatat 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggcaacccagactggctgctgttgggtcctaggcagtttcaatgacttatttagcatat 481
Query: 282 aatttcttgt 291
||||||||||
Sbjct: 482 aatttcttgt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
