Query= MSMg01no290_l20.b1 MSMg01no290_l20.b1 CHROMAT_FILE:
MSMg01no290_l20.b1 PHD_FILE: MSMg01no290_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:22 2005
(324 letters)
>mm_chr10_86443196_86443919
Length = 724
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 8 gaattcttgatgtgtaccaaaatcatctctcattcttatacccacctgtaaagcctgaag 67
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaattcttgatgtgcaacaaaatcatctctcattcttatacccacctgtaaagcctgaag 464
Query: 68 aaagatcagaatgaccctctttgaagacataaaatggggtcacatagctaaagctacctt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aaagatcagaatgaccctctttgaagacataaaatggggtcacatagctaaagctacctt 404
Query: 128 atgaatatgtttaaggacataagctgtcccttcttgctgttgttagtaatcatctctact 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atgaatatgtttaaggacataagctgtcccttcttgctgttgttagtaatcatctctact 344
Query: 188 actagactacctttggggtggtgctctccaccctgggccaaccaggggcatggggccatt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 actagactacctttggggtggtgctctccaccctgggccaaccaggggcatggggccatt 284
Query: 248 gaagaaattctttatctaacaaaaaggactcctgtcaatttcaaactgtagaggaattaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaagaaattctttatctaacaaaaaggactcctgtcaatttcaaactgtagaggaattaa 224
Query: 308 acacaggtccttctga 323
||||||||||||||||
Sbjct: 223 acacaggtccttctga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_l20.g1 MSMg01no290_l20.g1 CHROMAT_FILE:
MSMg01no290_l20.g1 PHD_FILE: MSMg01no290_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:22 2005
(313 letters)
>mm_chr10_86291902_86292614
Length = 713
Score = 590 bits (305), Expect = e-173
Identities = 312/315 (99%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 1 tcagtatctggcacagggaaacctggaattcagtgggcactgaatgaacacaggcacgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 199 tcagtatctggcacagggaaacctggaattcagtgggcactgaatgaacacaggcacaca 258
Query: 61 tgcatgcacacatgctcaagcacacacacacacacacacacacacacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgcatgcacacatgctcaagcacacacacacacacacacacacacacacacacacacaca 318
Query: 121 cacacacaca--tctcttccccttccccatattttgcatgtctagaagttccttgaggta 178
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cacacacacacatctcttccccttccccatattttgcatgtctagaagttccttgaggta 378
Query: 179 ccctatggattttagctctagagtctgtggtgggtaatttgttaatgtaaaatgtggaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccctatggattttagctctagagtctgtggtgggtaatttgttaatgtaaaatgtggaca 438
Query: 239 ccagggctgtagagatggttcaggagttaagagcactggctgttcttgcagaggtctcag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccagggctgtagagatggttcaggagttaagagcactggctgttcttgcagaggtctcag 498
Query: 299 gttaattcctagcac 313
|||||||||||||||
Sbjct: 499 gttaattcctagcac 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
