Query= MSMg01no290_m07.b1 MSMg01no290_m07.b1 CHROMAT_FILE:
MSMg01no290_m07.b1 PHD_FILE: MSMg01no290_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:24 2005
(287 letters)
>mm_chr10_120168119_120168805
Length = 687
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%)
Strand = Plus / Plus
Query: 1 tcttgggttcagctcctgccccatcaagttccacttcttcctgcctccacccccgtttga 60
|||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||
Sbjct: 201 tcttgggttcagctcctgccccatgaagttccacttcttcctgcccccagccccgtttga 260
Query: 61 gtccgttgtctcacgatagtcacccccagctctttgcttggctctctcccacccaccagc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gtccattgtctcacgatagtcacccccagctctttgcttggctctctcccacccaccggc 320
Query: 121 ttctctttcagtgtctctttggtgacccttgaggccctctatttaactggatacatttac 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ttctctttcagtgtctctttggtgacccttgaggccctctatttaactcgatacatttac 380
Query: 181 gcttccacttgctaccttctatcttctacttcaaaactgctgattccgatgagttagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttccacttgctaccttctatcttctacttcaaaactgctgattccgatgagttagggt 440
Query: 241 gagtgtctattttctctttcctctttagactgtaatcttcataagag 287
||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtgtctaatttctctttcctctttagactgtaatcttcataagag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_m07.g1 MSMg01no290_m07.g1 CHROMAT_FILE:
MSMg01no290_m07.g1 PHD_FILE: MSMg01no290_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:24 2005
(239 letters)
>mm_chr10_120331525_120332162
Length = 638
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 tccattctgtaggattttcaggaatccactagtgaaaatgttgagcccaggtagctctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tccattctgtaggattttcaggaatccactagtgaaaatgttgagcccaggtagctctct 378
Query: 61 ctataaaatttgtgaagagtgtgttaatgatagagtcattcaaaatagaaagaatttagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctataaaatttgtgaagagtgtgttaatgatagagtcattcaaaatagaaagaatttagg 318
Query: 121 gagcatgagttcctgaggtttggctcacggtcccggccttttcttttcgtagtggttgat 180
||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||
Sbjct: 317 gagcatgagttcctgaggtttggctcacgatcccagccttttcttttcatagtggttgat 258
Query: 181 atggcctcttgtgaagccttccattatttaatatctaacttcctttagcttctcctga 238
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 257 atggcctcttgtgaagccttcca-tatctaatatctaacttcctttagcttctcctga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
