Query= MSMg01no291_b23.b1 MSMg01no291_b23.b1 CHROMAT_FILE:
MSMg01no291_b23.b1 PHD_FILE: MSMg01no291_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:50 2005
(700 letters)
>mm_chr10_83918315_83919414
Length = 1100
Score = 1210 bits (626), Expect = 0.0
Identities = 680/698 (97%), Gaps = 1/698 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagccaagatc-tccattttagtttctttggaggcctctttttgcccagcaat 62
|||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 203 ggaattcaagccaagagcatacattttagtttctttggaggcctctgtttgcccagcaat 262
Query: 63 aatcaagtaaaatcttcacccgtatcatatgccattgtcggggcatccttgacaggatgg 122
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatcaagtaaaatcatcagacgtatcatatgccattgtcggggcatccttgacaggatgg 322
Query: 123 gagtccgaaagcatccttatcctggttcactgtgaaggtacacactccaggtgcaaatgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gagtccgaaagcatccttatcctggttcactgtgaaggtacacactccaggtgcaaatgt 382
Query: 183 attttaaagtcttctttatcatttgttcatgcgtgtgtgggagcatgcttgtcatggcac 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 attttaaagtcttctttatcatttgtccatgcgtgtgtgggagcatgcttgtcatggcac 442
Query: 243 acatatgcaagtccaaggacagctttgtggagtcagttctctccatccatctttatgcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acatatgcaagtccaaggacagctttgtggagtcagttctctccatccatctttatgcat 502
Query: 303 attccaaggatcaaactaatgttgccattattactcagaacttgcctttacctccagagc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attccaaggatcaaactaatgttgccattattactcagaacttgcctttacctccagagc 562
Query: 363 cagctcactggccccgcattttaataagactcaggtagattctttgtttggcttaacgga 422
|||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||| |
Sbjct: 563 cagctcactggccctgcattttaataagactcgggtagattctctgtttggcttaaccaa 622
Query: 423 gaagatgcaaaactgggaccagataagccagataagcttgccaagtcaagactctgcacc 482
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaagatgcaaaactggggccagataagccagataagcttgccaagtcaagactctgcacc 682
Query: 483 cctcagatgtcagtgccagacggtaggacggatgaaaggccaccattcagagggtgggct 542
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 683 cctcggatgtcagtgccagacggtagaacggatgaaaggccaccattcagagggtgggct 742
Query: 543 gggagagtccagcctggttagtggctctggtctcatgagatgatggagcttcagagaccg 602
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 743 gggagagtccagcctggttagtggctctggtcttatgagatgatggagcttcagagaccg 802
Query: 603 tgataaacaccacaggatccttctcattctagcagaaacacctggcaaggtccctttaca 662
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgataaacaccacaggatccatctcattctagcagaaacacctggcaaggtccctttaca 862
Query: 663 aagtgcagagtcaaagccacagggagctgaggtgttgt 700
||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aagtgcagagtcaaagccacagggagctgaggtgttgt 900
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_b23.g1 MSMg01no291_b23.g1 CHROMAT_FILE:
MSMg01no291_b23.g1 PHD_FILE: MSMg01no291_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:50 2005
(620 letters)
>mm_chr10_84094501_84095520
Length = 1020
Score = 1087 bits (562), Expect = 0.0
Identities = 604/618 (97%)
Strand = Plus / Minus
Query: 3 aagcatttcctcagctttagagactgctctgcaattactgtaaaccacagctctgtctgg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aagcatttcctcagctttagagactgctctgcaattactgtaaaccacagctctgtctgg 961
Query: 63 tccttacctaaggatccaaagcaattctataacctaggtaccatttcccatacccttcag 122
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 960 tccttacctaaggatccaaagcaattctataacctaggtaccatttcccacacccttcag 901
Query: 123 aggagggagtgaggcaaagaggacttattaattggcttaaggtcacatcatggggccggt 182
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 900 aggagggagtgaggcaaaggggacttattaattggcttaaggtcacatcatggggcatgt 841
Query: 183 ctccaggcaatgtggctccaagaacaaccttgtttctcacctgccaatgggtaaggcgtt 242
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctccaggcagtgtggctccaagaacaaccttgtttctcacctgccaatgggtaaggcgtt 781
Query: 243 gcggattatcctctggctgcctcgggtatactcaatgtccactgtgaccgccgcggagta 302
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 780 gcggattatcctctggctgcctcgggtatactcaatgtccactgtgattggggcggagta 721
Query: 303 cgtcatgtccctcagacggcactggagcagaatcacagtgagcgagcgacccctgccctc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgtcatgtccctcagacggcactggagcagaatcacagtgagcgagcgacccctgccctc 661
Query: 363 cagcaatcccactgtgagtacagtgcacagcagccccaactttccccactgagctgctga 422
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 660 cagcaatcccactgtgaatacagtgcacagcagcctgaactttccccactgagctgctga 601
Query: 423 cgccctgcctcagggcaagccgagtcacagttgtgtttagaacatgtgtgtgcttggcgt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cgccctgcctcagggcaagccgagtcacagttgtgtttagaacatgtgtgtgcttggcgt 541
Query: 483 ggaaacaagctaaaggctatcttcatgctttatacactgtgagacccagcttttacagga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggaaacaagctaaaggctatcttcatgctttatacactgtgagacccagcttttacagga 481
Query: 543 aggatccacaggaagatacaggaaaccacatgcaaactcccccagtgactgcaacatatc 602
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aggatccacaggaagataccggaaaccacatgcaaactcccccagtgactgcaacatatc 421
Query: 603 acactgacagttatgtgg 620
|||||| |||||||||||
Sbjct: 420 acactggcagttatgtgg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
