Query= MSMg01no291_n22.b1 MSMg01no291_n22.b1 CHROMAT_FILE:
MSMg01no291_n22.b1 PHD_FILE: MSMg01no291_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:46 2005
(322 letters)
>mm_chr10_127079144_127079865
Length = 722
Score = 559 bits (289), Expect = e-164
Identities = 306/315 (97%), Gaps = 6/315 (1%)
Strand = Plus / Minus
Query: 8 ggaattcattcggggataccacgtcccaaaccctagtgatagccactgagggctgccagg 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaattcattcggggataccacgtcccaaaccctagtgatagccactgagggctgccagg 326
Query: 68 gtgccaagtttgaatgcgaatatgctgtgcaaccttggcaaagttcctatctgtttctga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgccaagtttgaatgtgaatatgctgtgcaaccttggcaaagttcctatctgtttctga 266
Query: 128 ggtaaacactgagacacaccccaaaacaaatatgtgcaatttccctggccacaagaaaac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtaaacactgagacacaccccaaaacaaatatgtgcaatttccctggccacaagaaaac 206
Query: 188 acacacacacacacacacacacacacgcatacacacacgcatacacacacgcacacgcgc 247
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 205 acacacacacacacacacac------gcatacacacacacatacacacacgcacacgcgc 152
Query: 248 gtgtctgagctttacacatgtagcagcaggctctcacatatgacagccctcagagcctct 307
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 151 gtgtctgagctttacacatgtagcagcaggctctcacacatgacagccctcagagcctct 92
Query: 308 tagagtcacacacac 322
|||||||||||||||
Sbjct: 91 tagagtcacacacac 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_n22.g1 MSMg01no291_n22.g1 CHROMAT_FILE:
MSMg01no291_n22.g1 PHD_FILE: MSMg01no291_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:46 2005
(289 letters)
>mm_chr10_126893350_126894038
Length = 689
Score = 538 bits (278), Expect = e-157
Identities = 287/292 (98%), Gaps = 5/292 (1%)
Strand = Plus / Plus
Query: 1 aatccctggaatccatgcaaagatataaggaaaaaagtgactacacagttgtggtctgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccctggaatccatgcaaagatataaggaaaaaagtgactacacagttgtggtctgac 260
Query: 61 ctctccctgtaccagggcttgtgtatctacataaccccccaaacacacacacacacacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctccctgtaccagggcttgtgtatctacataaccccccaaacacacacacacacacac 320
Query: 121 acactaaccataaaccacacatgctatacaccacacatcacacaccacacatacactcaa 180
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ac--taaccataaaccacacatgctatacaccacacatcacacaccacacatacactcaa 378
Query: 181 aattttttagtctttgaaaaattgtatttgacaaagcaactaaagctg---acaaatttc 237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 aattttttagtctttgaaaaattgtatttgacaaagcaactaaagctgctgacaaatttc 438
Query: 238 ctgagattttggaaagttcagctgtgatttcccttagctgtttccattagta 289
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgagattttggaaagttcagctgtgatttcccttagctgtttccattagta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
