Query= MSMg01no292_a03.b1 MSMg01no292_a03.b1 CHROMAT_FILE:
MSMg01no292_a03.b1 PHD_FILE: MSMg01no292_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:56 2005
(291 letters)
>mm_chr10_90752359_90753047
Length = 689
Score = 513 bits (265), Expect = e-150
Identities = 280/285 (98%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgaagtgcactgccacccgtgctgtctctttaggactatggtacgtggctggt 64
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgaagtgca-tgccaccc-tgctgtctctttaggactatggtacgtggctggt 262
Query: 65 cttaccacccctgtttcacatatgaagacatccatgtccttaggatttattgattttcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttaccacccctgtttcacatatgaagacatccatgtccttaggatttattgattttcct 322
Query: 125 tgattttaattctggggtgggctctcaaccccagggagcttttggcaatgtctggagaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgattttaattctggggtgggctctcaaccccagggagcttttggcaatgtctggagaca 382
Query: 185 gtttggatggttgcagctggggttgggaccgggtaccagtgggatccactgggactcagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtttggatggttgcagctggggttgggaccgggtaccagtgggatccactgggactcagt 442
Query: 245 agaatccacaaatactaatgtccttgatgccatatgactacgtag 289
|||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 443 agaatccacaaatactaatgtccttgatgccaaaggactatgtag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 689
Length adjustment: 9
Effective length of query: 282
Effective length of database: 680
Effective search space: 191760
Effective search space used: 191760
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_a03.g1 MSMg01no292_a03.g1 CHROMAT_FILE:
MSMg01no292_a03.g1 PHD_FILE: MSMg01no292_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:56 2005
(290 letters)
>mm_chr10_90927296_90927985
Length = 690
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Minus
Query: 1 ctggccaagtgctgtttcttcttctggcaatgttcctgctggtctctagtggtcactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctggccaagtgctgtttcttcttctggcaatgttcctgctggtctctagtggtcactgaa 296
Query: 61 gcatctacttcctgcccagggcaacatctggagatagttctcaatctatgttcaaatcta 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gcctctacttcctgcccagggcaacatctggagatagttctcaatctatgttcaaatcta 236
Query: 121 ctagggacaaaggcacaagtggtataggggtaactgagattttaaaacttctcaagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ctagggacaaaggcacaagtggtataggggtaactgagattttaaaacttctcaagtgat 176
Query: 181 tctaatgtcccgcaggcttaaagcagctgcagttgaagaacttctagaaaaagccaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tctaatgtcccgcaggcttaaagcagctgcagttgaagaacttctagaaaaagccaaggt 116
Query: 241 cgaggatttcttagaagtattccaactaagaaatggatgtttaaataga 289
|||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cgaggacttcttagaagtattccaactaagaaatggatgtttaaataga 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
