Query= MSMg01no292_b18.b1 MSMg01no292_b18.b1 CHROMAT_FILE:
MSMg01no292_b18.b1 PHD_FILE: MSMg01no292_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:05 2005
(320 letters)
>mm_chr10_70092693_70093412
Length = 720
Score = 563 bits (291), Expect = e-165
Identities = 312/323 (96%), Gaps = 7/323 (2%)
Strand = Plus / Plus
Query: 5 gaattcactttgactgtgagaagacttaagagaaagctatctagagaaagccacactgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 198 gaattcactttgactgtgagaagacttaagagaaagctatctagagaaagccacactaga 257
Query: 65 gagattagactgaaggtgtctaaacccatggaagcatttcaagcaacaagacacaaccca 124
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 258 gagattagactgacggtgtctaaacccacggaagcatttcaagcaacaagacacaaccca 317
Query: 125 ggtgttttgttccttcccggataggcagtagtcaaaagtg-------ttgcctgcaatac 177
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 318 ggtgttttgttccttcccggataggcagtagtcaaaagtgtacagtattgcctgcaatac 377
Query: 178 gttcatgctaacaaaatgaactctgaacttaggaatgaatgaaataccaagaagagaaac 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gttcatgctaacaaaatgaactctgaacttaggaatgaatgaaataccaagaagagaaac 437
Query: 238 attcctaagatacagtgagccacgttcagaagggaaaattccaatgtgctaatttcttta 297
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atccctaagatacagtgagccacgttcagaagggaaaattccaatgtgctaatttcttta 497
Query: 298 gcaagcgaatggcaggtaattaa 320
|||||||||||||||||||||||
Sbjct: 498 gcaagcgaatggcaggtaattaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_b18.g1 MSMg01no292_b18.g1 CHROMAT_FILE:
MSMg01no292_b18.g1 PHD_FILE: MSMg01no292_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:05 2005
(268 letters)
>mm_chr10_70253804_70254471
Length = 668
Score = 495 bits (256), Expect = e-144
Identities = 265/268 (98%)
Strand = Plus / Minus
Query: 1 ttgcctttatgagatacacttgccacaatagggcaactcaagttctgcggctatatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgcctttatgagatacacttgccacaatagggcaactcaagttctgcggctatatttag 261
Query: 61 cgattatttttgaaaacatttaaataagcttcattcatgtatttatttgtggagggagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cgattatttttgaaaacatttaaataagcttcattcatgtatttatttgtggagggagca 201
Query: 121 cccttggaggtcaggggacagcttgtggagttgggtctctccttctacccctggaatcga 180
|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 200 tccttggagatcaggggacagcttgtagagttgggtctctccttctacccctggaatcga 141
Query: 181 actcagttcctcaggcttggcttggcatccttaccctctaacccatcttgcctgcttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 actcagttcctcaggcttggcttggcatccttaccctctaacccatcttgcctgcttgta 81
Query: 241 tttatttattcttaagtctatttttaaa 268
||||||||||||||||||||||||||||
Sbjct: 80 tttatttattcttaagtctatttttaaa 53
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
