Query= MSMg01no293_h18.b1 MSMg01no293_h18.b1 CHROMAT_FILE:
MSMg01no293_h18.b1 PHD_FILE: MSMg01no293_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:54 2005
(313 letters)
>mm_chr10_19987525_19988237
Length = 713
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%)
Strand = Plus / Minus
Query: 5 gaattcctagttctcggtgactccaaacaacactgacttatctcacagaagacaactgct 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 329 gaattcctagttctcggtgactccaaacaacactgactgatctcacagaagacaactgct 270
Query: 65 aggtcttctgatccctgtgtaacactacgctaaaccagtggtcctcaaatccagtgtgaa 124
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggtcttccgatctctgtgtaacactacgctaaaccagtggtcctcaaatccagtgtgaa 210
Query: 125 agtgctttcatccctgagcacagagtctgatccagtagatctgaggtaaggccagggatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agtgctttcatccctgagcacagagtctgatccagtagatctgaggtaaggccagggatt 150
Query: 185 tgtagtttgaaaaattctggaggtatcagtttaatatttttagaaatcctttgaaaatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtagtttgaaaaattctggaggtatcagtttaatatttttagaaatcctttgaaaatct 90
Query: 245 tctcaaaaatacaggttaggctggggaagcagcttggagtgcttgcctggcatgctcaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tctcaaaaatacaggttaggctggggaagcagcttggagtgcttgcctggcatgctcaga 30
Query: 305 gcccaagta 313
|||||||||
Sbjct: 29 gcccaagta 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_h18.g1 MSMg01no293_h18.g1 CHROMAT_FILE:
MSMg01no293_h18.g1 PHD_FILE: MSMg01no293_h18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:54 2005
(670 letters)
>mm_chr10_19823628_19824699
Length = 1072
Score = 1253 bits (648), Expect = 0.0
Identities = 666/672 (99%), Gaps = 2/672 (0%)
Strand = Plus / Plus
Query: 1 tctcctgagataaactgttattgaagaacacagtatgaatgccattgtttggtctaaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctgagataaactgttattgaagaacacagtatgaatgccattgtttggtctaaggg 260
Query: 61 cacttttattaggctcaagtcaaccacaaacagcatcagtgaaaagataacattttgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttttattaggctcaagtcaaccacaaacagcatcagtgaaaagataacattttgatt 320
Query: 121 ggaatattctttccctagggtgacaatgtattgattaatacctacagtggtgtgctcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaatattctttccctagggtgacaatgtattgattaatacctacagtggtgtgctcaag 380
Query: 181 atctctgacttcgggacatccaagaggcttgctggcataaacccatgtaccgaaaccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctctgacttcgggacatccaagaggcttgctggcataaacccatgtaccgaaaccttt 440
Query: 241 acaggtacgcttttcccgaacgatacagatcttggataattaagaatgtaattgctgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggtacgcttttcccgaacgatacagatcttggataattaagaatgtaattgctgagc 500
Query: 301 ctcagcgtcaggtgagagataaactaagtcaggtttctcacacccactgatgctgggatt 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ctcagcgtcaggtgagagataaactaagtcaggtttctcacaaacactgatgctgggatt 560
Query: 361 gcctgatgctcactggaaaactgtacggggcctgacttgccctcctgtcttcctgggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcctgatgctcactggaaaactgtacggggcctgacttgccctcctgtcttcctgggttc 620
Query: 421 tgagtggctcagcctgtgtgtaaaccactgaaggtgacttcccactctcagcgtgcttgc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 tgagtggctcagcctgtgtgtaaaccactgaaggtgacttcccactctcagcatgcttgc 680
Query: 481 tttttgtttcctgaccttttttttttttt-cccttgactggcttacagccactctgaccc 539
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tttttgtttcctgaccttttttttttttttcccttgactggcttacagccactctgaccc 740
Query: 540 tcacgagactgctgtttacaaacataccctcacccagcctctctgattcttactcatacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcacgagactgctgtttacaaacataccctcacccagcctctctgattcttactcatacc 800
Query: 600 caaacaacttcctatctgggctccagtttcccctccttcttagtccgttttctcc-agga 658
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 801 caaacaacttcctatctgggctccagtttcccctccttcttagtctgttttctcccagga 860
Query: 659 atcaattcccct 670
||||||||||||
Sbjct: 861 atcaattcccct 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1072
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1062
Effective search space: 700920
Effective search space used: 700920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
