XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTCAAATACATGAATAGTCACTGGTTACACCCTCAGAAAGATGCTCTGCA
GGTTTAGACTTTGATGTATAGTGGAATCTGGGTGAGCTTCGAACAAGATA
TTCTAAATAATTTTTTGGATATAAGTTCACAAATTATGTAGACATTTCTA
GATTAATAAATCATGCTTCTTGCTCTAAAAATTAATCACAAAGGAAAGAA
CATTAAAATAAAAACATTAAAATAAAAATGAGGTGACTTCATTATATAAT
TATATAATGTGACATTTTGGATTTTCAGTCATTTTGGATTTTAAGTCTTG
GTATTTCTGATGGTTACACCAATGCAAGAAGTTCCTACACATTATCACTC
AGGCCAGAAAAGGTAACAAGAGTGATTAAAATGGATTCAGTTCAGATACA
ATTTATGATTCTCTTTTACTCAGAGTGCAAATAGTCTAAGAGACCTTTGA
AAACTGTGTAGTAACAGGGCCTGAGACAGATATAAACTCAGTGCCCTGCA
GCCAGAAATAGAGGATTTACTGCAACACCAAACTCAATCAAGAAATAGCC
CACAAGCCATATTTCCAACTAGTTGTTGAATAATATGAAGGAAAACTAGA
ACATAAATATCTCTTTGTAAAGTCTTAAAAAATATGAAAATGTTCCTACT
CCAGTAACTATAGAACATACAGAAATAACAACTGTCAN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATCCAACACTCTGATCTTAGTATCTAATA
TAGTATTGCAATACTTAAAATATGAGTTTCAGACAAAGATGCATAATTTA
ACAGTCAGGAAACATACACGATGAGCAGGTATGTCTTTAAGAGTTACAAA
ATAAGGAAATACTAAACAAACAAACAAAACCATGTACACATTTTAATAAT
ATGTAGCAAAAATATGTAAAATCCCACAAAACTCCCAATGCCCAAATTCC
TAACAATTCAATAATGGAATAAAATAGTTTTGGAATGTACTAAAACATAA
AGCAAATATCCACTTCATACATACCACCAATACATTCTGTTACATATTCA
GAGTTATCATACTGCACTTACATAAATTGTTTCATGTATAGGACATACAT
GAGGAAAAGAAATAATGAATGTTTGTGAAAGAATTCCAAAACCTTTATGT
GGCTCTTCCACCCCAAAGAAGGCAGAGCATCATCGCTGAATCTACATGTG
CTTTGAAAAAGTAACTTCTTCCAAAAGAACATAGAACATAGAGAAGAACC
TCAGGATTGTACAGTGGAAAAATCTGACGAGGATCACTTCAATGGGATGA
AACACATGAACAATAAAGCCATCATCATGTTGACAGCACATAACCTTGGA
AGGAGGTAACAAAAATGAAATGCTTCTCCAAACACAGAN

Query= MSMg01no294_a05.b1 MSMg01no294_a05.b1 CHROMAT_FILE:
MSMg01no294_a05.b1 PHD_FILE: MSMg01no294_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:35 2005
         (698 letters)



>mm_chr10_46986613_46987709
          Length = 1097

 Score = 1220 bits (631), Expect = 0.0
 Identities = 652/659 (98%), Gaps = 1/659 (0%)
 Strand = Plus / Minus

                                                                        
Query: 39   accctcagaaagatgctctgcaggtttagactttgatgtatagtggaatctgggtgagct 98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 accctcagaaagatgctctgcaggtttagactttgatgtatagtggaatctgggtgagct 1038

                                                                        
Query: 99   tcgaacaagatattctaaataattttttggatataagttcacaaattatgtagacatttc 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 tcgaacaagatattctaaataattttttggatataagttcacaaattatgtagacatttc 978

                                                                        
Query: 159  tagattaataaatcatgcttcttgctctaaaaattaatcacaaaggaaagaacattaaaa 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  tagattaataaatcatgcttcttgctctaaaaattaatcacaaaggaaagaacattaaaa 918

                                                                        
Query: 219  taaaaacattaaaataaaaatgaggtgacttcattatataattatataatgtgacatttt 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917  taaaaacattaaaataaaaatgaggtgacttcattatataattatataatgtgacatttt 858

                                                                        
Query: 279  ggattttcagtcattttggattttaagtcttggtatttctgatggttacaccaatgcaag 338
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 857  ggattttcagtcattttggattttaagtcttggtatttctgaaggttacaccaatgcaag 798

                                                                        
Query: 339  aagttcctacacattatcactcaggccagaaaaggtaacaagagtgattaaaatggattc 398
            || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 797  aaattcctacacattatcactcaggccagaaaaggtaagaagagtgattaaaatggattc 738

                                                                        
Query: 399  agttcagatacaatttatgattctcttttactcagagtgcaaatagtctaagagaccttt 458
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 737  agttcagatacaatttatgattctcttttactcagagtacaaatagtctaagagaccttt 678

                                                                        
Query: 459  gaaaactgtgtagtaacagggcctgagacagatataaactcagtgccctgcagccagaaa 518
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 677  gaaaactgtgtagtaacagggcctgagacagatacaaactcagtgccctgcagccagaaa 618

                                                                        
Query: 519  tagaggatttactgcaacaccaaactcaatcaagaaatagcccacaagccatatttccaa 578
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 617  tagaggatttactgcaacaccaaactcaatcaggaaatagcccacaagccatatttccaa 558

                                                                        
Query: 579  ctagttgttgaataatatgaaggaaaactagaacataaatatctctttgtaaagtcttaa 638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557  ctagttgttgaataatatgaaggaaaactagaacataaatatctctttgtaaagtcttaa 498

                                                                       
Query: 639  aaaatatgaaaatgttcctactccagtaactatagaacatacagaaataacaactgtca 697
            |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497  aaaa-atgaaaatgttcctactccagtaactatagaacatacagaaataacaactgtca 440


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1097
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1087
Effective search space:   747856
Effective search space used:   747856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)