Query= MSMg01no296_c05.b1 MSMg01no296_c05.b1 CHROMAT_FILE:
MSMg01no296_c05.b1 PHD_FILE: MSMg01no296_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:15 2005
(603 letters)
>mm_chr10_124901127_124902130
Length = 1004
Score = 1100 bits (569), Expect = 0.0
Identities = 596/605 (98%), Gaps = 2/605 (0%)
Strand = Plus / Plus
Query: 1 cagggatctggaaggggttggagtggaggt-gcacatgatcaaactacactgcacgaagt 59
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 200 cagggatctggaaggagttggagtggaggttgcacatgatcaaactacactgcacgaagt 259
Query: 60 tctcaataagtaaaaccattatttaaaaattgtcacaactggaacagcagtatcaggttc 119
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 260 tctcaataagtaaaaccattatttaaaatttgtcacaactggaacagcagtatcaggttc 319
Query: 120 tttctattcgggtgctgacatagcaactctaacacagctattggacgcaaagctcttctt 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttctattcaggtgctgacatagcaactctaacacagctattggacgcaaagctcttctt 379
Query: 180 ttgttcagaaatatgctgttgaaaacatttggagttgatcccgtgcagatgccatttcgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgttcagaaatatgctgttgaaaacatttggagttgatcccgtgcagatgccatttcgg 439
Query: 240 gtataggaactgttgtttgcccacttgctgaggcaacagtgcatagaagttcccaccaca 299
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |
Sbjct: 440 gtataggaactgttgtttgcccacttgctgaagcaacagtgcatagaagtttccatcaga 499
Query: 300 cactaagctggatgtgttaaaaaaaataataacatacagttttacatgtaattactgctt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cactaagctggatgtgttaaaaaaaataataacatacagttttacatgtaattactgctt 559
Query: 360 caattaatagtccttcaaaaaatcaggctatcatccataacctgcatgcccttcattcac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caattaatagtccttcaaaaaatcaggctatcatccataacctgcatgcccttcattcac 619
Query: 420 aaagttgatagcttaaagagaaacaccctgactggactcagttacaacatcaacttcttc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagttgatagcttaaagagaaacaccctgactggactcagttacaacatcaacttcttc 679
Query: 480 aaaaacgtaaacccagcaggtccacttatgatggtaagttatgctacagttaattctgac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaaacgtaaacccagcaggtccacttatgatggtaagttatgctacagttaattctgac 739
Query: 540 tacagtgtttaagggatggaaaaaaggaaatggtgtctac-ttttgagaatgttgaaaag 598
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 740 tacagtgtttaagggatggaaaaaaggaaatggtgtctacattttgagaatgttgaaaag 799
Query: 599 gaact 603
|||||
Sbjct: 800 gaact 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_c05.g1 MSMg01no296_c05.g1 CHROMAT_FILE:
MSMg01no296_c05.g1 PHD_FILE: MSMg01no296_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:15 2005
(624 letters)
>mm_chr10_124901076_124902099
Length = 1024
Score = 1147 bits (593), Expect = 0.0
Identities = 617/625 (98%), Gaps = 1/625 (0%)
Strand = Plus / Plus
Query: 1 aaagaaaacaagagggggaagagcatacagttgcaaagtagggaggtgggccagggatct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 200 aaagaaaacaagagggggaagagcatacagttgcaaagtagggaggtggggcagggatct 259
Query: 61 ggaaggggttggagtggaggt-gcacatgatcaaactacactgcacgaagttctcaataa 119
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggaaggagttggagtggaggttgcacatgatcaaactacactgcacgaagttctcaataa 319
Query: 120 gtaaaaccattatttaaaaattgtcacaactggaacagcagtatcaggttctttctattc 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaaaaccattatttaaaatttgtcacaactggaacagcagtatcaggttctttctattc 379
Query: 180 gggtgctgacatagcaactctaacacagctattggacgcaaagctcttcttttgttcaga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggtgctgacatagcaactctaacacagctattggacgcaaagctcttcttttgttcaga 439
Query: 240 aatatgctgttgaaaacatttggagttgatcccgtgcagatgccatttcgggtataggaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatatgctgttgaaaacatttggagttgatcccgtgcagatgccatttcgggtataggaa 499
Query: 300 ctgttgtttgcccacttgctgaggcaacagtgcatagaagtttccatcacacactaagct 359
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 500 ctgttgtttgcccacttgctgaagcaacagtgcatagaagtttccatcagacactaagct 559
Query: 360 ggatgtgttaaaaaaaataataacatacagttttacatgtaattactgcttcaattaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggatgtgttaaaaaaaataataacatacagttttacatgtaattactgcttcaattaata 619
Query: 420 gtccttcaaaaaatcaggctatcatccataacctgcatgcccttcattcacaaagttgat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtccttcaaaaaatcaggctatcatccataacctgcatgcccttcattcacaaagttgat 679
Query: 480 agcttaaagagaaacaccctgactggactcagttacaacatcaacttcttcaaaaacgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agcttaaagagaaacaccctgactggactcagttacaacatcaacttcttcaaaaacgta 739
Query: 540 tacccagcaggtccacttatgatggtaagttatgctacagttaattctgactacagtgtt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacccagcaggtccacttatgatggtaagttatgctacagttaattctgactacagtgtt 799
Query: 600 taagggatggaaaaaaggaaatggt 624
|||||||||||||||||||||||||
Sbjct: 800 taagggatggaaaaaaggaaatggt 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
