Query= MSMg01no296_g20.b1 MSMg01no296_g20.b1 CHROMAT_FILE:
MSMg01no296_g20.b1 PHD_FILE: MSMg01no296_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:37 2005
(607 letters)
>mm_chr10_36518382_36519388
Length = 1007
Score = 1120 bits (579), Expect = 0.0
Identities = 600/607 (98%)
Strand = Plus / Plus
Query: 1 tttaataagaaataaataacctgatgatagttattcaggaaaacacagtctgctaccagc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tttaataagaaataaataacctgatgacagttattcaggaaaacacagtctgctaccagc 260
Query: 61 agatggaatcaactgtagatgttaagagagacacactcaagtacctcagcagtatgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatggaatcaactgtagatgttaagagagacacactcaagtacctcagcagtatgtata 320
Query: 121 tgtgtgtgaatgattttcctaccagtggaatcctataagtgcatagagagttaacagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtgaatgattttcctaccagtggaatcctataagtgcatagagagttaacagcat 380
Query: 181 acataataatttagcaattattctgattactgttatttctaatgaaattagtaaatatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 acataataatttagcaattattctgattactgttatttctaatgaaattagtaaacatta 440
Query: 241 tattctttccatatatactaaacctcaagaaaataaatatccagaagaataacgaatcag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tattctttccatatatactaaacctcaagaaaataaatatccagaagaataaggaatcag 500
Query: 301 ctggtgatcaagatcataccattaactggtgacttcctctctgcagggaccgaatgccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtgatcaagatcataccattaactggtgacttcctctctgcagggaccgaatgccat 560
Query: 361 tcccattcccctcggccatattgaatatctgttcttactcaataataaaacggaggctag 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccattcccctcagccatattgaatatctgttcttactcaataataaaacggaggctag 620
Query: 421 tgggttgtgctggctcattttctgtcaacttacctggagcaaggatcatttgagaggagg 480
||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 621 tgggttgtgctggatcattttctgtcaacttacctggagctagggtcatttgagaggagg 680
Query: 481 gaacttcagtagagaaaatgcctttataatatctgccagaggggcattttcttgatggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaacttcagtagagaaaatgcctttataatatctgccagaggggcattttcttgatggat 740
Query: 541 tttaatgtgtgagggccttgtccactgtaggtggcactacccctcagcaggtggtcctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttaatgtgtgagggccttgtccactgtaggtggcactacccctcagcaggtggtcctgt 800
Query: 601 ggtacgt 607
|||||||
Sbjct: 801 ggtacgt 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_g20.g1 MSMg01no296_g20.g1 CHROMAT_FILE:
MSMg01no296_g20.g1 PHD_FILE: MSMg01no296_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:37 2005
(598 letters)
>mm_chr10_36679434_36680433
Length = 1000
Score = 1036 bits (536), Expect = 0.0
Identities = 587/610 (96%), Gaps = 15/610 (2%)
Strand = Plus / Minus
Query: 1 cttgaatgcacaagaatgactcctaggagtggggaatatgaaacctgaatcaacttactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 640 cttgaatgcacaagaatgactcctaggagtggggaatatgaaacctgaattaacttactt 581
Query: 61 tctatat--------aaacaaacaaacaaacaaacagcccttggaggagatcagctatcc 112
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tctatataaacaaacaaacaaacaaacaaacaaacagcccttggaggagatcagctatcc 521
Query: 113 tagctattatttttcttaagttattaagctccacaagaaagagtaag-aaaaaaatcatt 171
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 520 tagctattatttttcttaagttattaagctccacaagaaagagtaagaaaaaaaatcatt 461
Query: 172 ttctcaaattatggccttatagcctgtctggtaccttcattaaatttataaactctgaaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttctcaaattatggccttatagcctgtctggtaccttcattaaatttataaactctgaaa 401
Query: 232 cccttccccatttaag---cttctatgattgtaaagaatttcctttgctatatggaatgg 288
||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 400 cccttccccattt-agcttcttctatgattgtaaagaatttcctttgctctatggaatgg 342
Query: 289 tgctggtgtctactaggctccaggttccccagctggaattggccagtgttattttaacca 348
||||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||| |
Sbjct: 341 tgctggtatctaccaggctccaggtt-cccagctggaattggccagtgtta-tttaaaaa 284
Query: 349 cccaattataggcatgttttcatgcatggtgtaatatttacccttgtgttatttaaatgc 408
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tccaattataggcatgttttcatgcatggtgtaatatttacccttgtgttatttaaatgc 224
Query: 409 taatttctgttgcaatctggatagggcattgtaatacttatttcaaatatctcctgcttc 468
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 223 taatttctgttgcaatctggatagggcattgtaatgcttatttcaaatatctcctgcttc 164
Query: 469 aaggttgtgcaaacaatgcttatcatttattctctgccttgtcaataaaaagctgatcag 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aaggttgtgcaaacaatgcttatcatttattctctgccttgtcaataaaaagctgatcag 104
Query: 529 ctaatgactgggcaaaagagagaatagggcgggacttctgccagttagtggagagggata 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 ctaatgactgggcaaaagagagaatagggcgggacttctgccagttagtggagagggata 44
Query: 589 gagagaagag 598
||||||||||
Sbjct: 43 gagagaagag 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 1000
Length adjustment: 10
Effective length of query: 588
Effective length of database: 990
Effective search space: 582120
Effective search space used: 582120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
