Query= MSMg01no297_e12.b1 MSMg01no297_e12.b1 CHROMAT_FILE:
MSMg01no297_e12.b1 PHD_FILE: MSMg01no297_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:41 2005
(536 letters)
>mm_chr10_76576938_76577873
Length = 936
Score = 978 bits (506), Expect = 0.0
Identities = 523/530 (98%), Gaps = 4/530 (0%)
Strand = Plus / Plus
Query: 5 ggaattcctgga--tttcgcttcaaagtaacacagactgtagcagttagccaggcctcaa 62
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcctggaggtt--gcttcaaagtaacacagactgtagcagttagccaggcctcaa 262
Query: 63 gaggaaggtaaaggaaaaaaggtgtgggatgtatccaagggatatgccatcaacagcagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaggaaggtaaaggaaaaaaggtgtgggatgtatccaagggatatgccatcaacagcagg 322
Query: 123 cttccgcctcatgtctatggattccagctgcgtgcagagcgcacggcatggcttagcagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttccgcctcatgtctatggattccagctgcgtgcagagcgcacggcatggcttagcagc 382
Query: 183 ctgtgtcccaggaaaagacagtcagggcactgccgttactcttacatttgctttgctagg 242
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 383 ctgggtcccaggaaaagacagtcagggcactgccgttactcttgcatttgctttgctagg 442
Query: 243 tctgtctgcagctggatgttccccgtgctgtttctttccttcacacagcttcaggtaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctgtctgcagctggatgttccccgtgctgtttctttccttcacacagcttcaggtaaaa 502
Query: 303 atctcactctatctataataaaccaggggctataagtggcttgtccatcctgcagcctac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atctcactctatctataataaaccaggggctataagtggcttgtccatcctgcagcctac 562
Query: 363 tctgggttacagcacatgggtacctgccaacctccctccacatagccgccctgaccccat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tctgggttacagcacatgggtacctgccaacctccctccacatagccgccctgaccccat 622
Query: 423 tagatcaggtaggttcttctccaacattcccttcacagatatagctggatgctcaccagg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tagatcaggtaggttcttctccaacattcccttcacagatatagctggatgctcaccagg 682
Query: 483 gatgtcctcctgtgctgactctgtatgaactcccacgggggtgggggggg 532
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 683 gatgtcctcctgtgctgactctgtatgaactcccacgggggcgggggggg 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_e12.g1 MSMg01no297_e12.g1 CHROMAT_FILE:
MSMg01no297_e12.g1 PHD_FILE: MSMg01no297_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:41 2005
(258 letters)
>mm_chr10_76744391_76745048
Length = 658
Score = 478 bits (247), Expect = e-139
Identities = 250/251 (99%)
Strand = Plus / Minus
Query: 1 agcatgcacgtgcacttagcacatagtcttatctgtaaatctttaagtaaatattaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agcatgcacgtgcacttagcacatagtcttatctgtaaatctttaagtaaatattaactc 353
Query: 61 tgtataccagatagagcggataccatcctatgtgacagactctgcagccagacaccaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgtataccagatagagcggataccatcctatgtgacagactctgcagccagacaccaaaa 293
Query: 121 acatgcctggaggatgaaaagcctaaaaacctttgtcttaaaccctgttaagtttttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acatgcctggaggatgaaaagcctaaaaacctttgtcttaaaccctgttaagtttttcta 233
Query: 181 caaaatcatttttctaattttcaaattgtgttttgtgtgtgtgtgtgtgtgtgtgtgtgt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 232 caaaatcatttttctaattttcaaattgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgt 173
Query: 241 gtgtgtgtgtg 251
|||||||||||
Sbjct: 172 gtgtgtgtgtg 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
