Query= MSMg01no298_c10.b1 MSMg01no298_c10.b1 CHROMAT_FILE:
MSMg01no298_c10.b1 PHD_FILE: MSMg01no298_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:46 2005
(419 letters)
>mm_chr10_122208027_122208845
Length = 819
Score = 762 bits (394), Expect = 0.0
Identities = 412/418 (98%)
Strand = Plus / Plus
Query: 1 atccaacaagcatgttaccaactgagccatccccccagctcattgaagttattttcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccaacaagcatgttaccaactgagccatccccccagctcattgaagttattttcttaa 260
Query: 61 gcaaggattaggaaatctaagccaaaccctgaacacagttgatcttatctgagcttggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaggattaggaaatctaagccaaaccctgaacacagttgatcttatctgagcttggca 320
Query: 121 gctaagaagagtcaggcctgatcagttcttggatgggagaactccaaataagattctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctaagaagagtcaggcctgatcagttcttggatgggagaactccaaataagattctgtt 380
Query: 181 taacttctcttgccaccgaataatgccacacggctctgcctatttctgggccataattat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcttctcttgccaccgaataatgccacacggctctgcctatttctgggccataattat 440
Query: 241 aaagatagcatattcacagacagctagatatgttctttattcaacagtaagactaacaac 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagatagcagaatcacagacagctagatatgttctttattcaacagtaagactaacaac 500
Query: 301 aagcaagatttatccaaggttgtattgggatatttgaatagcatgccaataaaaaattat 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 aagcaagatttatccaaggttgtattaggatatttgaatagcatgccaataaaaaattat 560
Query: 361 ggtagggatgtagggaaagaagactccttacagtaaatatatatatatatatatatgt 418
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 561 ggtagggatgtagggaaagaagactccttacagtaaatatatatatataaataaatgt 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_c10.g1 MSMg01no298_c10.g1 CHROMAT_FILE:
MSMg01no298_c10.g1 PHD_FILE: MSMg01no298_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:46 2005
(399 letters)
>mm_chr10_122383776_122384574
Length = 799
Score = 721 bits (373), Expect = 0.0
Identities = 395/407 (97%), Gaps = 9/407 (2%)
Strand = Plus / Minus
Query: 1 attcaagtactcatgcttatgtggattttacctcatagacccatctttccagccctcatc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 704 attcaagtactcatgcttatgtggatttaacctcatagacccatctttccagccctcatc 645
Query: 61 ccactccttctgagacagggtcttgctgtatagttgagactggcctaggacctgcaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccactccttctgagacagggtcttgctgtatagttgagactggcctaggacctgcaatta 585
Query: 121 tcctgtcttagcctcctaagtaccagaattggaaacaatccaccacgcccattttttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tcctgtcttagcctcctaagtaccagaattggaaacaatccaccacgcccattttttttt 525
Query: 181 tttaatttgtaaactaaactccttccgaaatatgtacataagaaagaatgtattccagag 240
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 524 tt-aatttgtaaactaaactccttccgaaatatgtacataaggaagaatgtattccagag 466
Query: 241 ttcaatgctatgtgtgtctttggacatccaatggggtcttggttaaatacccttaggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttcaatgctatgtgtgtctttggacatccaatggggtcttggttaaatacccttaggaga 406
Query: 301 ttaacatcgtgttaatactttttcgattatcgt--------taacttcgtggatcctgaa 352
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 405 ttaacatcgtgttaatactttttcgattatcgtggatcgattaacttcgtggatcctgaa 346
Query: 353 actgaacagaaatgatgtcctttgatgttttaccccacttgtcaaag 399
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 345 actgaacagaaatgatgtccttagatgttttaccccacttgtcaaag 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
