Query= MSMg01no298_d10.b1 MSMg01no298_d10.b1 CHROMAT_FILE:
MSMg01no298_d10.b1 PHD_FILE: MSMg01no298_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:51 2005
(534 letters)
>mm_chr10_117413980_117414913
Length = 934
Score = 934 bits (483), Expect = 0.0
Identities = 522/535 (97%), Gaps = 2/535 (0%)
Strand = Plus / Minus
Query: 1 acccagcttggtttgagctcctacagtatgagtttctgactgctcactgtcttcttcatc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 734 acccagcttggtttgagctcctacagtatgagtttctggctgctcactgtcttcttcatc 675
Query: 61 atccgggcgttagctcacagagaacagcagccatttttgctcactcctgtcagcatctcg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 atccgggtgttagctcacagagaacagcagccatttttgctcactcctgtcagcatctcg 615
Query: 121 aaccagcgtacgactctgaatgtgcaatctcaaatcagcttgggtttcagatctaccgca 180
||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 614 aaccagcatacgaccctgaatgtgcaatctcaagtcagcttgggtttcagatcaaccgca 555
Query: 181 aagaagctgtgattttagtaatcacctataaagtactataaccagagttcctacttgcag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 554 aagaagctgtgattttagtaatcacctataaagtactataaccagagttcctacttgcgg 495
Query: 241 ggtcactaaaa-tcactgctttaaacactgcagctaaaaaatgtcaccactgtctagcaa 299
||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 494 ggtcactaaaact-actgctttaaacactgcagctaaaaaacgtcaccactgcctagcaa 436
Query: 300 gcttctgtctacagtctcttcctaccctcttcttcatctgactctgtcatttatctctca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcttctgtctacagtctcttcctaccctcttcttcatctgactctgtcatttatctctca 376
Query: 360 ggtcccaacccggtgagacctcttccaggaagatgtctgaagcctgaaaccatccattaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggtcccaacccggtgagacctcttccaggaagatgtctgaagcctgaaaccatccattaa 316
Query: 420 ctgaggtgaggttaacaaatgtaaataatagtacattctgtaaagtcctgttaaactaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctgaggtgaggttaacaaatgtaaataatagtacattctgtaaagtcctgttaaactaat 256
Query: 480 ttcaattttcagcatttccctcgtttcttggagccaatacttctaatctttcaat 534
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttcagttttcagtatttccctcgtttcttggagccaatacttctaatctttcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_d10.g1 MSMg01no298_d10.g1 CHROMAT_FILE:
MSMg01no298_d10.g1 PHD_FILE: MSMg01no298_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:51 2005
(427 letters)
>mm_chr10_117265128_117265954
Length = 827
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%)
Strand = Plus / Plus
Query: 1 aggactgagcaggtttaaaaattatctttcaagaaaaaaagaggtccagattcctgtcaa 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aggactgagcaggtttaaaaattatctttcaagaaaaaaagaggcccagattcctgtcaa 260
Query: 61 aaataaaactcttagccaggtgtagtggagcctctgcttttgggaagctgaggcagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataaaactcttagccaggtgtagtggagcctctgcttttgggaagctgaggcagcagg 320
Query: 121 acgggggagtcggggccacagtgaggcggcctcacaaaccaaacataacgaagaacccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 acgggggagtcggggccacagtgaggcggcctcacaaaccaaacataacgaagaaccaac 380
Query: 181 caacatgaagctgcttatggcattctgtccgttctgaccagatttagtaccacaaatagg 240
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caacatgaagctgcttacagcattctgtccgttctgaccagatttagtaccacaaatagg 440
Query: 241 gaaaaggtctctcctaccacttcatgggttagtattaacagttccagtaaatagagctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaggtctctcctaccacttcatgggttagtattaacagttccagtaaatagagctat 500
Query: 301 aatcccgaccaatcctgccaaatcttttactgaaatcttcaggaacaaaacctgacctgc 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcccaaccaatcctgccaaatcttttactgaaatcttcaggaacaaaacctgacctgc 560
Query: 361 aactcaagaccatgtcttccagttctgttacacacgtcacctttgcgttcaggacctgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactcaagaccatgtcttccagttctgttacacacgtcacctttgcgttcaggacctgat 620
Query: 421 tgcaggg 427
|||||||
Sbjct: 621 tgcaggg 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
