Query= MSMg01no298_f20.b1 MSMg01no298_f20.b1 CHROMAT_FILE:
MSMg01no298_f20.b1 PHD_FILE: MSMg01no298_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:02 2005
(660 letters)
>mm_chr10_65214668_65215726
Length = 1059
Score = 1261 bits (652), Expect = 0.0
Identities = 658/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 1 gcctgtgtaacctgaagaggaccagcatggatcttctcaacaagagacatgcagcgccat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gcctgtgtaacctgaagaggaccagcatggatcttctcaacaagagacatgcagtgccat 260
Query: 61 tcttatctttctcttttagaaggtaacaaagtgccttgatttgctgaaatagaaacacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttatctttctcttttagaaggtaacaaagtgccttgatttgctgaaatagaaacacta 320
Query: 121 tgagttgtaggatgctctaatttcaaatagttcttctcacctttcacctctgttgtctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagttgtaggatgctctaatttcaaatagttcttctcacctttcacctctgttgtctta 380
Query: 181 caatgacatctagtgtcttgtaagtctgtacccagcaaaatcaattcccatactgctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgacatctagtgtcttgtaagtctgtacccagcaaaatcaattcccatactgctgtc 440
Query: 241 actctacagaatcaacgtgccttaactctcacttgctaacgtcatcaggatacttgtcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actctacagaatcaacgtgccttaactctcacttgctaacgtcatcaggatacttgtcca 500
Query: 301 catcttctttgaagagtgtcaccctcattagctaacctgttagaaaagtaaagtctaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcttctttgaagagtgtcaccctcattagctaacctgttagaaaagtaaagtctaaga 560
Query: 361 ttttacttctggcactgctgaatcaaaatccccatgttaataagatctcaggggatttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttacttctggcactgctgaatcaaaatccccatgttaataagatctcaggggatttca 620
Query: 421 aagtatgcttgagtaatagacaccctgggctttgttatgaaaaagagaagagtaattgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtatgcttgagtaatagacaccctgggctttgttatgaaaaagagaagagtaattgag 680
Query: 481 atagcctagaggcatggcagttgacatatactactgctgttgccagatgaaggcaaatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagcctagaggcatggcagttgacatatactactgctgttgccagatgaaggcaaatga 740
Query: 541 atgcctttaagacatacacctgaggttaaaagaaaagagctttgtccagtggatacatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgcctttaagacatacacctgaggttaaaagaaaagagctttgtccagtggatacatgc 800
Query: 601 caagtgacagcgactgtgtgactttggattagttggggggaaaaaaaaagcatgacacag 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 801 caagtgacagcgactgtgtgactttggattagttggggg-aaaaaaaaagcatgacacag 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space: 681850
Effective search space used: 681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_f20.g1 MSMg01no298_f20.g1 CHROMAT_FILE:
MSMg01no298_f20.g1 PHD_FILE: MSMg01no298_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:02 2005
(654 letters)
>mm_chr10_65251005_65252058
Length = 1054
Score = 1236 bits (639), Expect = 0.0
Identities = 652/659 (98%), Gaps = 5/659 (0%)
Strand = Plus / Minus
Query: 1 acatatttctatgggttgactctagaccctctgttctgcacataataatccttggatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acatatttctatgggttgactctagaccctctgttctgcacataataatccttggatccc 718
Query: 61 aaatatgaagatattttcagcatttccaggttgtcaagccttcctttttcctctggattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 717 aaatatgaagatattttcagcatttccaggttgtcaagccttcctttttccactggattc 658
Query: 121 tgcaattctttatatttaaaatttttaaatccttttttttaaactctgcaatattctaaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 657 tgcaattctttatatttaaaatttttaaatcctttttttttaactctgcaatattctaaa 598
Query: 181 atgaattttaaatttttcagtatctactaaattttgtctattgtgcaataaatattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atgaattttaaatttttcagtatctactaaattttgtctattgtgcaataaatattcaat 538
Query: 241 tttggattaccgattaaatgaagacaattttaaagtatatgcaaattaatgagacattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tttggattaccgattaaatgaagacaattttaaagtatatgcaaattaatgagacattga 478
Query: 301 ctctgttaacaaatagctaccatcttgaataaaacgaatacatgggaagagatatccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctctgttaacaaatagctaccatcttgaataaaacgaatacatgggaagagatatccaca 418
Query: 361 atggaataggaatagtataaattcactactttgaaaatttaaacaagtagaaaatactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atggaataggaatagtataaattcactactttgaaaatttaaacaagtagaaaatactga 358
Query: 421 tagaact-----acaaaacaaaacaaaacaaatcctgaaaatatgaggagggaatctttg 475
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tagaactacaaaacaaaacaaaacaaaacaaatcctgaaaatatgaggagggaatctttg 298
Query: 476 ccacctatacagatgacagagtactaatttcagaatatacaaagaacttaccacaaaaaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ccacctatacagatgacagagtactaatttcagaatatacaaagaacttaccacaaaaaa 238
Query: 536 agaaagaaaacacaaagaatcattaaaacaaaggactcactcaaaagaaaatggggttaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agaaagaaaacacaaagaatcattaaaacaaaggactcactcaaaagaaaatggggttaa 178
Query: 596 cagaagaaaaaatagctaagtattatatgaaattttttcttttccctatcaattagaaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cagaagaaaaaatagctaagtattatatgaaattttttcttttccctatcaattagaaa 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
