Query= MSMg01no298_g20.b1 MSMg01no298_g20.b1 CHROMAT_FILE:
MSMg01no298_g20.b1 PHD_FILE: MSMg01no298_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:07 2005
(692 letters)
>mm_chr10_65214645_65215735
Length = 1091
Score = 1315 bits (680), Expect = 0.0
Identities = 686/688 (99%), Gaps = 1/688 (0%)
Strand = Plus / Plus
Query: 5 gaattcctaacatacaccagcctgtgtaacctgaagaggaccagcatggatcttctcaac 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaacatacacgagcctgtgtaacctgaagaggaccagcatggatcttctcaac 264
Query: 65 aagagacatgcagtgccattcttatctttctcttttagaaggtaacaaagtgccttgatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagagacatgcagtgccattcttatctttctcttttagaaggtaacaaagtgccttgatt 324
Query: 125 tgctgaaatagaaacactatgagttgtaggatgctctaatttcaaatagttcttctcacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgctgaaatagaaacactatgagttgtaggatgctctaatttcaaatagttcttctcacc 384
Query: 185 tttcacctctgttgtcttacaatgacatctagtgtcttgtaagtctgtacccagcaaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcacctctgttgtcttacaatgacatctagtgtcttgtaagtctgtacccagcaaaat 444
Query: 245 caattcccatactgctgtcactctacagaatcaacgtgccttaactctcacttgctaacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caattcccatactgctgtcactctacagaatcaacgtgccttaactctcacttgctaacg 504
Query: 305 tcatcaggatacttgtccacatcttctttgaagagtgtcaccctcattagctaacctgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcatcaggatacttgtccacatcttctttgaagagtgtcaccctcattagctaacctgtt 564
Query: 365 agaaaagtaaagtctaagattttacttctggcactgctgaatcaaaatccccatgttaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agaaaagtaaagtctaagattttacttctggcactgctgaatcaaaatccccatgttaat 624
Query: 425 aagatctcaggggatttcaaagtatgcttgagtaatagacaccctgggctttgttatgaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagatctcaggggatttcaaagtatgcttgagtaatagacaccctgggctttgttatgaa 684
Query: 485 aaagagaagagtaattgagatagcctagaggcatggcagttgacatatactactgctgtt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaagagaagagtaattgagatagcctagaggcatggcagttgacatatactactgctgtt 744
Query: 545 gccagatgaaggcaaatgaatgcctttaagacatacacctgaggttaaaagaaaagagct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gccagatgaaggcaaatgaatgcctttaagacatacacctgaggttaaaagaaaagagct 804
Query: 605 ttgtccagtggatacatgccaagtgacagcgactgtgtgactttggattagttgggggga 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 805 ttgtccagtggatacatgccaagtgacagcgactgtgtgactttggattagttggggg-a 863
Query: 665 aaaaaaaagcatgacacagcatccaata 692
||||||||||||||||||||||||||||
Sbjct: 864 aaaaaaaagcatgacacagcatccaata 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1091
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1081
Effective search space: 737242
Effective search space used: 737242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_g20.g1 MSMg01no298_g20.g1 CHROMAT_FILE:
MSMg01no298_g20.g1 PHD_FILE: MSMg01no298_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:07 2005
(665 letters)
>mm_chr10_65251005_65252069
Length = 1065
Score = 1257 bits (650), Expect = 0.0
Identities = 663/670 (98%), Gaps = 5/670 (0%)
Strand = Plus / Minus
Query: 1 acatatttctatgggttgactctagaccctctgttctgcacataataatccttggatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 acatatttctatgggttgactctagaccctctgttctgcacataataatccttggatccc 718
Query: 61 aaatatgaagatattttcagcatttccaggttgtcaagccttcctttttcctctggattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 717 aaatatgaagatattttcagcatttccaggttgtcaagccttcctttttccactggattc 658
Query: 121 tgcaattctttatatttaaaatttttaaatccttttttttaaactctgcaatattctaaa 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 657 tgcaattctttatatttaaaatttttaaatcctttttttttaactctgcaatattctaaa 598
Query: 181 atgaattttaaatttttcagtatctactaaattttgtctattgtgcaataaatattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atgaattttaaatttttcagtatctactaaattttgtctattgtgcaataaatattcaat 538
Query: 241 tttggattaccgattaaatgaagacaattttaaagtatatgcaaattaatgagacattga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tttggattaccgattaaatgaagacaattttaaagtatatgcaaattaatgagacattga 478
Query: 301 ctctgttaacaaatagctaccatcttgaataaaacgaatacatgggaagagatatccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctctgttaacaaatagctaccatcttgaataaaacgaatacatgggaagagatatccaca 418
Query: 361 atggaataggaatagtataaattcactactttgaaaatttaaacaagtagaaaatactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atggaataggaatagtataaattcactactttgaaaatttaaacaagtagaaaatactga 358
Query: 421 tagaact-----acaaaacaaaacaaaacaaatcctgaaaatatgaggagggaatctttg 475
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tagaactacaaaacaaaacaaaacaaaacaaatcctgaaaatatgaggagggaatctttg 298
Query: 476 ccacctatacagatgacagagtactaatttcagaatatacaaagaacttaccacaaaaaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ccacctatacagatgacagagtactaatttcagaatatacaaagaacttaccacaaaaaa 238
Query: 536 agaaagaaaacacaaagaatcattaaaacaaaggactcactcaaaagaaaatggggttaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agaaagaaaacacaaagaatcattaaaacaaaggactcactcaaaagaaaatggggttaa 178
Query: 596 cagaagaaaaaatagctaagtattatatgaaattttttcttttccctatcaattagaaaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cagaagaaaaaatagctaagtattatatgaaattttttcttttccctatcaattagaaaa 118
Query: 656 atgtaaatca 665
||||||||||
Sbjct: 117 atgtaaatca 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
