Query= MSMg01no298_k04.b1 MSMg01no298_k04.b1 CHROMAT_FILE:
MSMg01no298_k04.b1 PHD_FILE: MSMg01no298_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:22 2005
(497 letters)
>mm_chr10_104251348_104252242
Length = 895
Score = 911 bits (471), Expect = 0.0
Identities = 489/495 (98%), Gaps = 2/495 (0%)
Strand = Plus / Plus
Query: 3 gaattctttaactgtttacaccatttgcttgaggaagtataaatggcagacacaaccaga 62
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctttaactgttta-agcatttgcttgaggaagtataaatggcagacacaaccaga 261
Query: 63 ttcacattctgcacattaatattttaacaggagaaaaacatattatacttttcgttttca 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttcacattctgcacattaatattttaacaggagaaaaacatattatacttttcgttttc- 320
Query: 123 actttcaacttgataggaaaacattagtagctttctctgcctctgtatacatcaatgtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttcaacttgataggaaaacattagtagctttctctgcctctgtatacatcaatgtat 380
Query: 183 ttatgacagtttgactttagtgattctggctgcccttttcaagtcctagggtttttattc 242
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttataacagtttgactttagtgattctggctgcccttttcaagtcctagggtttttattc 440
Query: 243 tggttcactaaaacccactaaggcacagaaaatccacggtgatattttggctccaaaaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggttcactaaaacccactaaggcacagaaaatccacggtgatattttggctccaaaaca 500
Query: 303 aatgtgacattcctcaaagccatcattcttcttaacttgtcaacagcttcagaccaattt 362
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 aatgtgacattccccaaagccatcattcttcttaacttgtcaacaacttcagaccaattt 560
Query: 363 gctatattgatatggaagtaaattattgaaagcaaaatacggcaggaaggtaagaccctt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctatattgatatggaagtaaattattgaaagcaaaatacggcaggaaggtaagaccctt 620
Query: 423 ctatagcagtttgaaagattttacaatttagacaagtaaatgactacatttagacagtgt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctatagcagtttgaaagattttacaatttagacaagtaaatgactacatttagacagtgt 680
Query: 483 tattatgatttactc 497
|||||||||||||||
Sbjct: 681 tattatgatttactc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 895
Length adjustment: 10
Effective length of query: 487
Effective length of database: 885
Effective search space: 430995
Effective search space used: 430995
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_k04.g1 MSMg01no298_k04.g1 CHROMAT_FILE:
MSMg01no298_k04.g1 PHD_FILE: MSMg01no298_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:22 2005
(354 letters)
>mm_chr10_104443714_104444467
Length = 754
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Minus
Query: 1 tctacttttctatcaatattgaggatattagaaatccctggcaaaatgacttctttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tctacttttctatcaatattgaggatattagaaatccctggcaaaatgacttctttctaa 495
Query: 61 tgtgatgttcctgcaactgttggaacttgttattcaaaagagcccgattaacatccagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgtgatgttcctgcaactgttggaacttgttattcaaaagagcccgattaacatccagag 435
Query: 121 acacagggaaatctggcttcataagtgcaaattaaatatctttgttaccctttaatattt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 434 acacagggaaatctggcttcataagtgcaaattcaatatctttgttaccctttaatattt 375
Query: 181 aaaatatccatttctgctccccaggttaaaatgggcttaattaaatgtcctggcagctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaaatatccatttctgctccccaggttaaaatgggcttaattaaatgtcctggcagctaa 315
Query: 241 tttataatctgtttggcatcatatttgctttcttagaaaattaatgattttttagttagt 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 314 tttataatctgtttggcatcatatttgctttcttagaaaattactgattttttagttagt 255
Query: 301 ttcaagatttaagagggtttaaaaagaactctaagttacaacactctttattag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttcaagatttaagagggtttaaaaagaactctaagttacaacactctttattag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
