Query= MSMg01no300_d18.b1 MSMg01no300_d18.b1 CHROMAT_FILE:
MSMg01no300_d18.b1 PHD_FILE: MSMg01no300_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:20 2005
(686 letters)
>mm_chr10_104821307_104822392
Length = 1086
Score = 1208 bits (625), Expect = 0.0
Identities = 670/687 (97%), Gaps = 6/687 (0%)
Strand = Plus / Minus
Query: 5 gaattcattagccaattatgtccaattcttcctttcctcataatatttagtttctcccag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaattcattagccaattatgtccaattcttcctttcctcataatatttagtttctcccag 667
Query: 65 aacaatataataggaccttaatttgtagtccctttaccatggcaattggatgccccgcag 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 aacaatataataggagcttaatttgtagtccctttaccatggcaattggatgccccgcag 607
Query: 125 ttgtttccattgttgaaa-tcgtgggctgatgtaaaacgtggttgaaaatagaacagaaa 183
|||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||
Sbjct: 606 ttgtttccattgttgaaagt-gtgggctgatgtaaaatgtggttgaaaatagaacagaaa 548
Query: 184 gagtggattttaaaaattcaatccatactgtaaagattctggcatgtttagttcataact 243
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 547 gagtggattttaaaaattcaatccatactgtaaagattctggcatgtttcgttcataact 488
Query: 244 aacagccatcatggaaactgatacaagattaaaatttcccactaatactgtttgggctag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 487 aacagccatcatggaaactgatacaagattaaaatttcccactaatactgtttggactag 428
Query: 304 gaatagcctgtcaagttattttaatgatcatgattggaatttagagcacaatgttaatgt 363
||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 427 gaacagcctgtctagttattttaatgatcatgatcggaatttagagcacaatgttaatgt 368
Query: 364 ttgttcctttttgacttgatcttgaccttcgtgactcacacataaaaaggattgtatttc 423
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 367 ttgttcctttttgacttgatcttgacctttgtgactcacacataaaaaggtttgtatttt 308
Query: 424 tgagtactgtggaactgaaggtacccagcaaggcatgggagctggcaactaagggttttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgagtactgtggaactgaaggtacccagcaaggcatgggagctggcaactaagggttttg 248
Query: 484 cccaagagtgcatttcagtaaataggttccaggagggtcttaaaaa----acaaaacaaa 539
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 247 cccaagagtgcatttcagtaaataggttccaggagggtcttaaaaacaaaacaaaacaaa 188
Query: 540 acaaaactgggttcttctacaccccccttccttttcctcaatccacactaactacatgtc 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 187 acaaaactgggttcttctacaccccccttccttttcctcaatccacactaactatatgtc 128
Query: 600 agtcatgtacctggcaaaacttcttgcttgtctctcagcagggttctaagggctatgagc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 agtcatgtacctggcaaaacttcttgcttgtctctcagcagggttctaagggctatgagc 68
Query: 660 cagtcaaacagtgattgacagttcagt 686
|||||||||||||||||||||||||||
Sbjct: 67 cagtcaaacagtgattgacagttcagt 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_d18.g1 MSMg01no300_d18.g1 CHROMAT_FILE:
MSMg01no300_d18.g1 PHD_FILE: MSMg01no300_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:21 2005
(343 letters)
>mm_chr10_104662643_104663386
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 ttaaataatcatctcatttttgagatcctcttaaaaa-tcacttgaatttcccttgaagt 59
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ttaaataatcatctcatttttgagatcctcttaaaaaatcacttgaatttcccttgaagt 260
Query: 60 acaccatgaagttcctcatctcagtgtgttcttggcagtcggtttggctatgttgtggtt 119
||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 261 acaccgtgaagttcctcatctcagggtgttcttggctgtcggtttggctatgttgtggtt 320
Query: 120 taattgccagctatgtaaacgatcaccacgctggcgctgagcatcccagactgtggttgg 179
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 321 taattgccagctatgtaaacgatcaccacgctggtgctgagcatcccaggctgtggttgg 380
Query: 180 cttctacttcctaggccaggtttcattaagggacaagaggatttgcatgatacatttaaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 cttctacttcctaggccaggtttcattaagggacaagaggatttgcatgatatatttaaa 440
Query: 240 acattacaactgcactccactgcataagatgtctacattacgaaacataggaaatagagc 299
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 441 acattacaactgcactccactgcataagatgtctacactacgaaacataggaaatagaac 500
Query: 300 acattggagagtgatctcctactgtggtggtttaaatatgcttg 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acattggagagtgatctcctactgtggtggtttaaatatgcttg 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
