Query= MSMg01no302_d17.b1 MSMg01no302_d17.b1 CHROMAT_FILE:
MSMg01no302_d17.b1 PHD_FILE: MSMg01no302_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:49 2005
(319 letters)
>mm_chr10_73965394_73966112
Length = 719
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgattgaactattatttcctctatcctgatgccatccttgccatcttcaacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgattgaactattatttcctctatcctgatgccatccttgccatcttcaacat 264
Query: 65 aattgatgacttgattaatagttctgtgatgttagttaaagccattgtgtgccctgatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattgatgacttgattaatagttctgtgatgttagttaaagccattgtgtgccctgatgg 324
Query: 125 atggttaatattcaattatagaagcttttatcttccttctgttgatgatatttttgtgac 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 atggttaatattcaattatagaagcttttatcttccttctgttggtgatatttttgtgac 384
Query: 185 atttctttaaaatgaatgagttgttcttttgactgcaaaagatagtaattttctagactc 244
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttctttaaaatgaataagttgttcttttgactgcaaaagatagtaattttctagactc 444
Query: 245 tccttttaacaagtcttacctcacatcagaccaatccctagggagttgtaggatcttaca 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 tccttttaacaagtcttacctcacatcagaccaatcccaagggagttgtaggatcttaca 504
Query: 305 taaacataaatgt 317
|||||||||||||
Sbjct: 505 taaacataaatgt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_d17.g1 MSMg01no302_d17.g1 CHROMAT_FILE:
MSMg01no302_d17.g1 PHD_FILE: MSMg01no302_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:49 2005
(644 letters)
>mm_chr10_74110867_74111909
Length = 1043
Score = 1191 bits (616), Expect = 0.0
Identities = 637/644 (98%), Gaps = 1/644 (0%)
Strand = Plus / Minus
Query: 1 tgtgacagctcttagggttttcagtcaacgagaagaataaatctagacacttggggggac 60
|||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 843 tgtgacagctcttagggttttcagtcaatgagaagaataaatctagacactt-ggaggac 785
Query: 61 accatgggttaatggtcacagggtgaccagtaccttgccacactgactgctctgcttctt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 accatgggctaatggtcacagggtgaccagtaccttgccacactgactgctctgcttctt 725
Query: 121 ccttgaatttagtgtccacaaggcttcggaaatctcaggtcacaacaggactgtgatggt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 724 ccttgaatttagtgtccacaaggcttcggaaatctcaggttacaacaggactgtgatggt 665
Query: 181 atttgctgtgtatgttggttcattaggaacggcagggtttatttgtttgctttatttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 atttgctgtgtatgttggttcattaggaacggcagggtttatttgtttgctttatttccc 605
Query: 241 cttagtgaaggctggtatttattaagaacaaaagcaaaagaaacttctcatgcccttcta 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 604 cttagtgaaggctggtatttattaagaacaaaagctaaagaaacttctcatgcccttcta 545
Query: 301 ggaaaaccaggcacaaatttccttatatatacttccatgtaaatactatctatgttaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggaaaaccaggcacaaatttccttatatatacttccatgtaaatactatctatgttaatt 485
Query: 361 ctttttaagactaacagtacctacatatttcccctgtgctttgcagttttaatcatgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctttttaagactaacagtacctacatatttcccctgtgctttgcagttttaatcatgagt 425
Query: 421 ccagatttcatgggttatttaaagtcctgtgagtgtagtgcttcagctaatccagattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccagatttcatgggttatttaaagtcctgtgagtgtagtgcttcagctaatccagattta 365
Query: 481 ttcagccagcgttttagggctgtctctttccttcaaatacacaaaccaaatatttgattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcagccagcgttttagggctgtctctttccttcaaatacacaaaccaaatatttgattt 305
Query: 541 ggttgttccccatcaaggctgctcatctttatctcacctcaggaatagattagcttcagg 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 ggttgttccccatcaaggctgctcatctttatctcaccccaggaatagattagcttcagg 245
Query: 601 atcatttatatcagaacgatcatcttataagtgctgaaatcgga 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atcatttatatcagaacgatcatcttataagtgctgaaatcgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1043
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1033
Effective search space: 654922
Effective search space used: 654922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
