Query= MSMg01no303_c17.b1 MSMg01no303_c17.b1 CHROMAT_FILE:
MSMg01no303_c17.b1 PHD_FILE: MSMg01no303_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:00 2005
(666 letters)
>mm_chr10_106122359_106123419
Length = 1061
Score = 1174 bits (607), Expect = 0.0
Identities = 648/663 (97%), Gaps = 7/663 (1%)
Strand = Plus / Plus
Query: 5 gaattcatttgaataggactcattttggaaaaaaaaaaggagagtgagagagagaaagtg 64
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttgaataggattcattttg---aaaaaaaaggagagtgagagagagaaagtg 261
Query: 65 cctgccaatatagtgcttttaacaggagagaatgaaagtagaaataacccaacattctgt 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cctgccaatatagtgcttgtaacaggagagaatgaaagtagaaataacccaacattctgt 321
Query: 125 gtaagtgtataaataaatgattctattcttataatagcagactgcttagcaacgtatatc 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 322 gtaagtgtataaataaatgattctattcttataacagcagactgcttagcaacgtatatc 381
Query: 185 agcactgataaacttcaaaggttcaatggtaagtaaaagaggaagttatttatagaattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agcactgataaacttcaaaggttcaatggtaagtaaaagaggaagttatttatagaattt 441
Query: 245 tc-aaaccaggatgatgctgtatgttacccaggagtacgtgcatatgcaaagagcgtaca 303
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tccaaac-aggatgatgctgtatgttacccaggagtacgtgcatatgcaaagagcgtaca 500
Query: 304 tggatttgcatgagaatgatacaacccaaactcaagatagtgactattcttggaatggaa 363
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggtttgcatgagaatgatacaacccaaactcaagatagtgactattcttggaatggaa 560
Query: 364 atgataaccacaggtttgtgacacatttgttcctatgacagattttaaaataaacataat 423
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 atgataagcacaggtttgtgacacatttattcctatgacagattttaaaataaacataat 620
Query: 424 aatgtgagatatttcttcaaaactcactttagtcacatatttgtttcaatttatatgttt 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 aatgtgagatatttcttcaaaactcactttagtcacatatttgtttcaatttatatgtgt 680
Query: 484 tctggagtttttttcctaaaatgattcactgttatttataattatctgttaattatttaa 543
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 tctggagtttttttc-taaaatgattcactgttatttataattatctgt-aattatttaa 738
Query: 544 ttatagataactaattatgtgaatctttgttttaaatatgtagtatgcttgtcatttaat 603
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 739 ttatagataactaattatgtgaatctttgttttaaatatggagtatgcttgtcatttaat 798
Query: 604 gactcatttggatctatgaagtctgtatttaaacgattattgaagttctagtttaattta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gactcatttggatctatgaagtctgtatttaaacgattattgaagttctagtttaattta 858
Query: 664 ttt 666
|||
Sbjct: 859 ttt 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1061
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1051
Effective search space: 689456
Effective search space used: 689456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_c17.g1 MSMg01no303_c17.g1 CHROMAT_FILE:
MSMg01no303_c17.g1 PHD_FILE: MSMg01no303_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:00 2005
(649 letters)
>mm_chr10_106160671_106161719
Length = 1049
Score = 1093 bits (565), Expect = 0.0
Identities = 628/649 (96%)
Strand = Plus / Minus
Query: 1 tcttaggctttaccctacccactttgacatgaaagcacatgccagaaagctctcagtcaa 60
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 827 tcttaggctttaccctatccactttgacatgaaagcacatgccagaaagttctcaatcaa 768
Query: 61 acaatgaaatatatgaaagtttgttctaaattattttaaaatattatgttactatgcctc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 767 acaatgaaatatatgaaagtttgttgtaaattattttaaaatattatgttactatgcctc 708
Query: 121 tgtgtttattcaatgaatatttatatgtcatgaagcctggtgtcatcattgactttaagg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tgtgtttattcaataaatatttatatgtcatgaagcctggtgtcatcattgactttaagg 648
Query: 181 aacccttttaggaaagaaaataaaacactcacacaaagcacagtctgttaaagtttggag 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 647 aacccttttaggaaagaaaataaaacactcacacaaagcacagtatgttaaagtttggag 588
Query: 241 tctctggactctcaactggtcatgactgggatggacactaatgcccactgtttgccattc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 587 tctctggactctcaactggtcatgactgggatggacactaatgtccactgtttgccattc 528
Query: 301 gtctattttcatgaacaataaagatatctgttggaaactgcgatttgaatgacaatggct 360
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 527 gtctattttcatgaacaataaagatatctgttgaaaactgtgatttgaatgacaatggct 468
Query: 361 ctcacaggttcacatatttgaaaacatttttcttcttccaatacttcccatagagaccca 420
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 467 cccacagggtcacatatttgaaaacatttttcttcttccaatacttcccatagagatcca 408
Query: 421 ccatgttctcttcaaactcacatgtgttttgggagaagtagaagatgtggtcctgttgaa 480
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||
Sbjct: 407 ccatgttctcttcaaactcacatctgttttgggagaagtagaagatgtggccctgttaaa 348
Query: 481 ggatggtgcatcccaactggaggaggtgtaggcttgctggaggaggtgtagtcctactgc 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 347 agatggtgcatcccaactggaggaggtgtaggcttgctggaggaggtgtagccctactgg 288
Query: 541 agaatgtgtggccctgcttggggaggtgtgtcattggggcaaagcttgaagcttcagagg 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 287 agaatgtgtggccctgcttggggaggtgtgtcattggggcaaagcttgaaacttcagagg 228
Query: 601 cctcacattgtcctctttatctcttgctgcttcaagaattatcagctct 649
|||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 227 cctcacatcgtcctcattatctcttgctgcttcaagaattatcagctct 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
