Query= MSMg01no303_h07.b1 MSMg01no303_h07.b1 CHROMAT_FILE:
MSMg01no303_h07.b1 PHD_FILE: MSMg01no303_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:22 2005
(347 letters)
>mm_chr10_70092330_70093076
Length = 747
Score = 551 bits (285), Expect = e-161
Identities = 331/347 (95%), Gaps = 8/347 (2%)
Strand = Plus / Minus
Query: 4 ggaattcttctaagaacttttgatgctttgattccacagattgtaccagggtaaaattaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggaattcttctaagaacttttgatgctttgattccacagattgtaccagggtaaaattaa 447
Query: 64 tattttatttttatttcctcttgtttgctagttatta-gaataatgatctggtacctagt 122
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 446 tattttatttttatttcctcttgtttgctagtt-ctaggaataatgatctggtacctagt 388
Query: 123 agtcttgaaaggtaaccaataaactttgtgggagtttgttacctccttacagttttgtgc 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtcttgaaaggtgaccaataaactttgtgggagtttgttacctccttacagttttgtgc 328
Query: 183 aggttgtggtagttggactccagtcatcaggattcttttgtttttttgtctttgttttgt 242
|||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 327 aggttgtggtagttggactccagtcatcaggattcttttggttttttgg-ttt--tttgt 271
Query: 243 ttttt-caagacaggggttctctttatagccctgtttgtcctggaactcactttgtagac 301
||||| | |||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 270 ttttttcgagacaggggttctctttatagctctggctgtcctggaactcactttgtagac 211
Query: 302 caggctggcctcgaaa-tcagaaatctgcctgcctctgcctcccgag 347
|||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 210 caggctggcctc-aaactcagaaatctgcctgcctctgcctcccgag 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_h07.g1 MSMg01no303_h07.g1 CHROMAT_FILE:
MSMg01no303_h07.g1 PHD_FILE: MSMg01no303_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:23 2005
(498 letters)
>mm_chr10_69930720_69931617
Length = 898
Score = 862 bits (446), Expect = 0.0
Identities = 485/498 (97%)
Strand = Plus / Plus
Query: 1 atcagcaaatagttactgggtatctgttacagatcttatggagaacaagtccttcgaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagcaaatagttactgggtatctgttacagatcttatggagaacaagtccttcgaggg 260
Query: 61 agggacccttgtgaagcttccgtttctatacgtgtctgttggttggcagtggcaaactat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 agggacccttgtgaagcttccgtttctacacgtgtctgttggttggcagtggcaaactat 320
Query: 121 cagcaaagagagtgaagcatcgttaccataaggccatacctactctgataaggccaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcaaagagagtgaagcatcgttaccataaggccatacctactctgataaggccaacaa 380
Query: 181 ggatgggcaagattgcaagctttcctctcatagatttgcttctgttattcttgctatcac 240
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatgggcgagattgcaagctttcctctcatagatttgcttctgttattcttgctatcac 440
Query: 241 tggcctggtgtggttctgtcccctttaaccatccaccagctctaagccctgtggaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggcctggtgtggttctgtcccctttaaccatccaccagctctaagccctgtggaaatga 500
Query: 301 gtttgaagcatggcctatacgttagaaatactgggcaccttccccccatctgtgggtgct 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gtttgaagcatggcctatacgttagaaatactgggcaccttcatcccatctgtgggtgct 560
Query: 361 atgttgagtgctgtgctgtattatgttcctgttccctttcattttggctgctgtgtttct 420
|| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 atattgagtgctgtgctgtgttatgttcctgttttctttcattttggctgctgtgtttcg 620
Query: 421 tccgacttacagccttcctggaagaacaggcagtacaattaatattttaatctcatagct 480
|| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 621 tctgacttacagccttcctggaagaagagtcagtacaattaatattttaatctcatagct 680
Query: 481 tttcttaggctttcctcc 498
||||||||||||||||||
Sbjct: 681 tttcttaggctttcctcc 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
