Query= MSMg01no304_k20.b1 MSMg01no304_k20.b1 CHROMAT_FILE:
MSMg01no304_k20.b1 PHD_FILE: MSMg01no304_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:38 2005
(691 letters)
>mm_chr10_74702719_74703805
Length = 1087
Score = 1222 bits (632), Expect = 0.0
Identities = 675/695 (97%), Gaps = 13/695 (1%)
Strand = Plus / Plus
Query: 1 gtcaaagatagtaaatcagtcagctaatgtctgccttcaccttaagtggagaaaaacttt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gtcaaagatagtaaatcagtcagctaatgtatgccttcaccttaagtggagaaaaacttt 260
Query: 61 gagttcttttatttaaaagtccccccccccccatcccccccctaccccaccccggtctaa 120
|||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||
Sbjct: 261 gagttcttttatttaaaagt--cccccccccctt--cccccctaccccaccctggtctaa 316
Query: 121 gaggtggttggtaaaggcatttgcttccgggcatggccacctgtgtttgatccccaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaggtggttggtaaaggcatttgcttccgggcatggccacctgtgtttgatccccaggcc 376
Query: 181 ccacatagaggaaggagggaataggctcccggaagttggtctctgccctccacctgtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccacatagaggaaggagggaataggctcccggaagttggtctctgccctccacctgtgaa 436
Query: 241 atgtgttacactttgagtacagtaaggcacatacatgtgtacatacacatgcacacacat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgtgttacactttgagtacagtaaggcacatacatgtgtacatacacatgcacacacat 496
Query: 301 taaataaataagtaaatatat----aattttagtaacatcaagtaggttttcttcttttc 356
||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 497 taaataaataagtaaatatataagcaa----agtaacatcaagtaggttttcttcttttc 552
Query: 357 tataggtttttaacccctggtgttctcataaagaagtcactttctgttgctacaattaaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tataggtttttaacccctggtgttctcataaagaagtcactttctgttgctacaattaaa 612
Query: 417 ccaccattaccaaagcagcttataaaagagtttatttttggcttcactttaaagtaatga 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 -caccattaccaaagcagcttataaaagagtttatttttggcttcactttaaagtaatga 671
Query: 477 agattttcttgacccttagtgacaatttttagaacttaccacagtataggctgtcctcat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agattttcttgacccttagtgacaatttttagaacttaccacagtataggctgtcctcat 731
Query: 537 tgttgcctgtgtagttcattgaggtcatccctgttcatgagtcatgtcctaaatgcaagt 596
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 732 tgttgcctgtgtagttcattgaggtcatccctgttcgtgagtcatgtcctaaatgcaagt 791
Query: 597 ttattaagggtgactccttcctggcttactgaatgtggcacatgtggncacacagcaggc 656
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 792 ttattaagggtgactccttcctggcttactgaatgtggcacacgtgggcacacagcaggc 851
Query: 657 atccataaagtcttttattgtatgtgtgatttggt 691
|||||||||||||||||||||||||||||||||||
Sbjct: 852 atccataaagtcttttattgtatgtgtgatttggt 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1087
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1077
Effective search space: 733437
Effective search space used: 733437
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no304_k20.g1 MSMg01no304_k20.g1 CHROMAT_FILE:
MSMg01no304_k20.g1 PHD_FILE: MSMg01no304_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:43:38 2005
(621 letters)
>mm_chr10_74859054_74860074
Length = 1021
Score = 946 bits (489), Expect = 0.0
Identities = 533/553 (96%), Gaps = 11/553 (1%)
Strand = Plus / Minus
Query: 1 tagttcccccttaaaactttcatgtgccccctcttatatttaattcttcaatatac---- 56
|||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 553 tagttcccccttaagactttcatgtgccccctcaaatatttaattcttcaatatactttt 494
Query: 57 --tttttatttttatttatttagttttaatgccccaataaacttacagggtgactccctt 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tatttttatttttatttatttagttttaatgccccaataaacttacagggtgactccctt 434
Query: 115 tctagatccacaaaacaggtcatttatcagtcttctggatggggctgcctgacagatggt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctagatccacaaaacaggtcatttatcagtcttctggatggggctgcctgacagatggt 374
Query: 175 acagtcctttggtccatataaggggccgcagccatccttcttcctcaaaatggagtaaaa 234
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acagtcccttggtccatataaggggccgcagccatccttcttcctcaaaatggagtaaaa 314
Query: 235 aattgcttgtaaaatagactttcctagagcaatggtgcccaaccttcctaatgcctttta 294
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aacagcttgtaaaatagactttcctagagcaatggtgcccaaccttcctaatgcctttta 254
Query: 295 atagagttcctcgtgttgtggtgaccacccaaccataaaattactttgttgttacttcct 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atagagttcctcgtgttgtggtgaccacccaaccataaaattactttgttgttacttcct 194
Query: 355 aattgtaatttttgctactgttgggatcctaatgtaaatatctgatatgtaatgtaaata 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aattgtaatttttgctactgttgggatcctaatgtaaatatctgatatgtaatgtaaata 134
Query: 415 tctgatatctcatacgcagccctcaaagtggttgtgacccacaggctgagaaccaccatc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tctgatatctcatacgcagccctcaaagtggttgtgacccacaggctgagaaccaccatc 74
Query: 475 taaagcaacgaatg----aaccacgttat-aaaaaataacgctatttttgtacaacatgg 529
|||||||||||||| ||||||||| | ||||||||||||||||| ||||||| ||||
Sbjct: 73 taaagcaacgaatgaatcaaccacgttgtaaaaaaataacgctatttctgtacaatatgg 14
Query: 530 agctagttaaagt 542
|||||||||||||
Sbjct: 13 agctagttaaagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
