Query= MSMg01no305_d14.b1 MSMg01no305_d14.b1 CHROMAT_FILE:
MSMg01no305_d14.b1 PHD_FILE: MSMg01no305_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:53 2005
(430 letters)
>mm_chr10_102657358_102658187
Length = 830
Score = 748 bits (387), Expect = 0.0
Identities = 427/459 (93%), Gaps = 29/459 (6%)
Strand = Plus / Plus
Query: 1 tcagaaaacttctccaaactataaaaacttgccataattttgccataatttaggcaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaaaacttctccaaactataaaaacttgccataattttgccataatttaggcaaaaa 260
Query: 61 cctacagtcataatcttttgtttgtttgtttgtttcataaggatttattgaacatctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctacagtcataatcttttgtttgtttgtttgtttcataaggatttattgaacatctccc 320
Query: 121 aggtgccagacaatgatactaaagagaatcttacccactgggtaaccatgacggcagatt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 aggtgccagacaatgatactaaagagaatcttatccactgggtaaccatgacggcagatt 380
Query: 181 tttacagtacactagggcattgtgcctttcaaaaggtgatctagtgccatctagtggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttacagtacactagggcattgtgcctttcaaaaggtgatctagtgccatctagtggact 440
Query: 241 ccaaagatcaaggcatattagtaaaaacatttctacaggaaaaatgtctagaatttttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaagatcaaggcatattagtaaaaacatttctacaggaaaaatgtctagaatttttac 500
Query: 301 tttatccctcaataacttaaatacaactttttggaaaaaaggta---------------- 344
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tttatccctcaataacttaaatacaactctttggaaaaaaggtaaccttgatatatttct 560
Query: 345 -------------caatgactttgagctttaggttcaggagttgtgttgcagatgtatgg 391
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaacatctggcacaatgactttgagctttaggttcaggagttgtgttgcagatgtatgg 620
Query: 392 cataattagattataatctcataaaaattaaaatacggt 430
||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 cataaatagattataatctcataaaaattaaaatacggt 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_d14.g1 MSMg01no305_d14.g1 CHROMAT_FILE:
MSMg01no305_d14.g1 PHD_FILE: MSMg01no305_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:53 2005
(343 letters)
>mm_chr10_102745690_102746433
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 ggatttactctgtgaggtctggagaacaactgagtgtcccttagaaacctaaacatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggatttactctgtgaggtctggagaacaactgagtgtcccttagaaacctaaacatagaa 485
Query: 61 atagttcccatagcaatggttatggtactggaggtaaataccgaaaaggtatcacttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atagttcccatagcaatggttatggtactggaggtaaataccgaaaaggtatcacttgga 425
Query: 121 ttactcgggctttttctacatttctcttcttttaatacattttggggtgtttagtgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttactcgggctttttctacatttctcttcttttaatacattttggggtgtttagtgttga 365
Query: 181 acacacaggcatgaaatactgatggtttgtgtatt-gtgtcttatatctgcagcccagtc 239
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 364 acacacaggcatgaaatactgatggtttgtgtattagggtcttatatctgcagcccagtc 305
Query: 240 ttaaaatgtagcaaatagaatggtaaaaatccttcagctggaaaaaatttttaattccag 299
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 304 ttaaaatgtagcaaatagaatggtaaaaatccttcagctggaaaaaatagttaattccag 245
Query: 300 tgaaaatgtgcaaacataaggtatcacaaacacataaactggtc 343
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 244 tgaaaatgtgcaaacataaggtatcacaaatacataaactggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
