Query= MSMg01no305_g16.b1 MSMg01no305_g16.b1 CHROMAT_FILE:
MSMg01no305_g16.b1 PHD_FILE: MSMg01no305_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:19 2005
(412 letters)
>mm_chr10_103904611_103905420
Length = 810
Score = 677 bits (350), Expect = 0.0
Identities = 387/404 (95%), Gaps = 10/404 (2%)
Strand = Plus / Plus
Query: 7 attctagttcagctcagccaatagaaatataagagttcgtgtgacatgaccaacacataa 66
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 207 attctagttcagctcagccaatagaaatat--gagttcatgtgacatgaccaacacataa 264
Query: 67 tctttgtcgcttttccagtattccagcttacattaggcaggcaccaagataattttaatc 126
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 265 tctttgtcacttttccagtattccagcttacattaggcagacaccaagataattttaatc 324
Query: 127 tctgttggatgaggtcatgattttgtcacatgatttatctctcttgtttgaacaaatatg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgttggatgaggtcatgattttgtcacatgatttatctctcttgtttgaacaaatatg 384
Query: 187 gaggtcaacatgacctctaaaacttctgtggcttcatgaaactgtgtgcagctttaaatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaggtcaacatgacctctaaaacttctgtggcttcatgaaactgtgtgcagctttaaatt 444
Query: 247 cttccattatttatgaaactacttcattatattgagccacctagaacagaactttaaaaa 306
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 cttccattatttatgaaactacttcattatattgagccacctagaacagacctttaaaaa 504
Query: 307 aaaaagaaacttttttaatgcagtaaacataaggagtgactatatgcagatattttactg 366
||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 505 aaagagaaacttttttaatgcagtaaacat---gag-----atatgcagataatttactg 556
Query: 367 tagttctcaaaagttggattggaatcttcaagtaggctcacaca 410
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 557 tagttctcacaagttggattggaatcttcaagtaggctcacaca 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 810
Length adjustment: 9
Effective length of query: 403
Effective length of database: 801
Effective search space: 322803
Effective search space used: 322803
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_g16.g1 MSMg01no305_g16.g1 CHROMAT_FILE:
MSMg01no305_g16.g1 PHD_FILE: MSMg01no305_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:19 2005
(385 letters)
>mm_chr10_103988321_103989102
Length = 782
Score = 679 bits (351), Expect = 0.0
Identities = 374/383 (97%), Gaps = 3/383 (0%)
Strand = Plus / Minus
Query: 1 attaatatattgacatatttgaacatcattatattttggataataactatactgacctga 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 580 attaatatattgacatatttgaagatcattatactttggataataactatactgacctga 521
Query: 61 agagcttcagacatgagtcatacaaatatttgattttacttgtacggaaggcaaacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agagcttcagacatgagtcatacaaatatttgattttacttgtacggaaggcaaacattg 461
Query: 121 attaatacatatttatagtctccaaaaaaaaaaaagagagaaatatcacatacctggtac 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 460 attaatacatatttatagtctcc---aaaaaaaaagagagaaatatcacatacctggtac 404
Query: 181 caagagcacaaagagatcatgccatggtggaagctggttcctactacagtaaagtcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 caagagcacaaagagatcatgccatggtggaagctggttcctactacagtaaagtcatca 344
Query: 241 tccgtgcactctatatacagtacccgaagaagacactgactttgctgttgttctttatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tccgtgcactctatatacagtacccgaagaagacactgactttgctgttgttctttatca 284
Query: 301 ataaaatcagatgtcatcaggaagagatactttttagggagttaaacatggtatcaaaac 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 283 ataaaatcagatgtcatcaggaagagatacttggaagggagttaaacatggtatcaaaac 224
Query: 361 taaaacatatacggatatttaat 383
| |||||||||||||||||||||
Sbjct: 223 tcaaacatatacggatatttaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 782
Length adjustment: 9
Effective length of query: 376
Effective length of database: 773
Effective search space: 290648
Effective search space used: 290648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
