Query= MSMg01no305_k11.b1 MSMg01no305_k11.b1 CHROMAT_FILE:
MSMg01no305_k11.b1 PHD_FILE: MSMg01no305_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:51 2005
(423 letters)
>mm_chr10_19958112_19958935
Length = 824
Score = 360 bits (186), Expect = e-103
Identities = 222/234 (94%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 187 gctttcttatttcaagacctcctccccacacataagggggtgctacggggtttctgtaca 246
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 387 gctttcttatttcaagacctcctccccacacctaagggggtgctacggggtttctgtatg 446
Query: 247 tgtgagtctctgtcccagcacctcagttccattg-ccttcaagcacagggaaacaggcaa 305
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 447 tgtgagtttctgtcccagcacctcagttccattggccttcaagcacagggaaacaggcaa 506
Query: 306 agtgggaaggcctctcagacccgagacagtgtgggtgtcctgcaagggcaggccaaacag 365
||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 507 agtgggaaggcctctcagaccagagacagtgtgggtgtcctgcgagggcaggtcaaacag 566
Query: 366 ttttttttactctaattacagttaaagggaagacagtgttatcccagctcttgg 419
|| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttctacatactctaattacagttaaagggaagacagtgttatcccagctcttgg 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_k11.g1 MSMg01no305_k11.g1 CHROMAT_FILE:
MSMg01no305_k11.g1 PHD_FILE: MSMg01no305_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:51 2005
(325 letters)
>mm_chr10_20120124_20120847
Length = 724
Score = 605 bits (313), Expect = e-177
Identities = 322/325 (99%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 1 tgagggtctggttggtactcagctccttttcccaaaagcggaggcggaagtacaaggatt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 524 tgagggtctggttggtactcagctccttttcccaaaagcgga-gcggaagtacaaggatt 466
Query: 61 ttaagcaggaaccatgaaactatgggtagtgagcatatcatgtttgtccacccatgcctg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttaagcaggaaccatgaaactaagggtagtgagcatatcatgtttgtccacccatgcctg 406
Query: 121 gccgggtgcactgtgggtctcagctgtgcttgtgaaggaggtggctctgaccccttgtgg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 405 gccgggtgcactgtgggtctcagcagtgcttgtgaaggaggtggctctgaccccttgtgg 346
Query: 181 tgacctggcctgtgaccttgactgttgcaggtttcatgacttacatcgtggagccgctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgacctggcctgtgaccttgactgttgcaggtttcatgacttacatcgtggagccgctgt 286
Query: 241 tccgggagtgggcccggtttactgggaacagcaccctgtcggagaacatgctaagccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tccgggagtgggcccggtttactgggaacagcaccctgtcggagaacatgctaagccatc 226
Query: 301 tcgcgcacaacaaagcccagtggaa 325
|||||||||||||||||||||||||
Sbjct: 225 tcgcgcacaacaaagcccagtggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
