Query= MSMg01no306_e17.b1 MSMg01no306_e17.b1 CHROMAT_FILE:
MSMg01no306_e17.b1 PHD_FILE: MSMg01no306_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:02 2005
(554 letters)
>mm_chr10_126560165_126561119
Length = 955
Score = 930 bits (481), Expect = 0.0
Identities = 496/501 (99%), Gaps = 1/501 (0%)
Strand = Plus / Minus
Query: 1 ctaattacagtgcttgagggtggagcaggataatgacttctaggtctcctgagctaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaattacagtgcttgagggtggagcaggataatgacttctaggtctcctgagctaagtg 442
Query: 61 ccaccctgcctgaaatggggatgtatttcagtgttgcacatttgccaggtgtggctccac 120
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 441 ccaccctgcctgaaatggggatgtatttcagtgttgcacattcgccaggtatggctccac 382
Query: 121 atagagccctggatttgactcactgaaggtttcagccgtgcagtgcgctcttttcagacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagagccctggatttgactcactgaaggtttcagccgtgcagtgcgctcttttcagacg 322
Query: 181 cactggattattccaccgaggacacttaagccgttttcctgcttggcaatctgtttgctc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cactggattattccaccgaggacacttaagccattttcctgcttggcaatctgtttgctc 262
Query: 241 taatttgctttttttttttttt-aatttgaataagaggggtgtgctcgtgtacgtccata 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatttgctttttttttttttttaatttgaataagaggggtgtgctcgtgtacgtccata 202
Query: 300 cgtgagtgtttgtgacatatcgaggccagagatcggcacgggcgtctccctctattgctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtgagtgtttgtgacatatcgaggccagagatcggcacgggcgtctccctctattgctc 142
Query: 360 cctacctttgtttttgagacagggtttttggttgacgctggagcatgccaatttgccaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cctacctttgtttttgagacagggtttttggttgacgctggagcatgccaatttgccaat 82
Query: 420 ttggctagactggctggccaagaagcccccaggatcagcctattctgtttgtcttagggt 479
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 81 ttggctagactggctggccaagaagcccccaggatctgcctattctgtttgtcttagggt 22
Query: 480 tgttattgctgtgataaaaca 500
|||||||||||||||||||||
Sbjct: 21 tgttattgctgtgataaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 955
Length adjustment: 10
Effective length of query: 544
Effective length of database: 945
Effective search space: 514080
Effective search space used: 514080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_e17.g1 MSMg01no306_e17.g1 CHROMAT_FILE:
MSMg01no306_e17.g1 PHD_FILE: MSMg01no306_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:02 2005
(292 letters)
>mm_chr10_126409048_126409740
Length = 693
Score = 495 bits (256), Expect = e-144
Identities = 281/292 (96%), Gaps = 7/292 (2%)
Strand = Plus / Plus
Query: 1 agcgacagccagggagcagcctggagggagggagaggcgcgcctgcttgcaagggagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 201 agcgacagccagggagcagcctggagggagggagaggcgcgcctgcttggaagggaggcg 260
Query: 61 ggtggggcacagaaggggccccagctatcctttccctactccgcaagccaagagcagcta 120
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 261 ggtggggcacagaaggggccccagctatcctttccctactc--ctagccaagagcagcta 318
Query: 121 g----gcagagggaggtttggtttggtccggggaacctgtaaatactggactccaggaaa 176
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctatgcagagggaggtttggtttggtccggggaacctgtaaatactggactccaggaaa 378
Query: 177 cttaatctgctcctgtggcttccttatttaggaccaggctaggtccccaattgctggggc 236
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttgatctgctcctgtggcttccttatttaggaccaggctaggtccccaattgctggggc 438
Query: 237 ctagctcaatgtgatctcccagaacctgggagggaaggagccgcctttggtg 288
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 ctagctcaatgtgatctcccagaacctgggagggaaggagccgc-tttggtg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
