Query= MSMg01no306_g13.b1 MSMg01no306_g13.b1 CHROMAT_FILE:
MSMg01no306_g13.b1 PHD_FILE: MSMg01no306_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:11 2005
(638 letters)
>mm_chr10_82632163_82633200
Length = 1038
Score = 706 bits (365), Expect = 0.0
Identities = 428/477 (89%), Gaps = 44/477 (9%)
Strand = Plus / Minus
Query: 1 aaggaagccattaaggctggaaggaaggaagagacttggcagaggaacgtgggggaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaggaagccattaaggctggaaggaaggaagagacttggcagaggaacgtgggggaggag 374
Query: 61 ctgacggtctcgcatgcgatggtggccctgtatatgaggtaggctgtgctccccaaggtc 120
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 373 ctgacggtctcgcatgcgatggtggccctgtatgtgaggtaggctgtggtccccaaggtc 314
Query: 121 acactgaaggtcagtgacacaggaattctccattaataatgggcagcatggctgtgaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acactgaaggtcagtgacacaggaattctccattaataatgggcagcatggctgtgaggg 254
Query: 181 gcagacaggagcctggaggtctcttggaggctggctatactatctcaatcacaggggaat 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 253 gcagacaggagcctggaggtctcttggagactggctatactatctcaatcacaggggaat 194
Query: 241 tcactgcccccccccccaagcctctacgagaaatgtcacatagcctcagttagactacag 300
|||||| |||||||||||||
Sbjct: 193 tcactg-ccccccccccaag---------------------------------------- 175
Query: 301 gatcctctacgagaaatgtcacatagcctcagttagactacaggatcctttctccagcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 174 ---cctctacgagaaatgtcacatagcctcagttagactacaggatcctttctctagcta 118
Query: 361 agaagctgttcagccagcacctgagattcccgagatgctttcccacactaatgaggcatt 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 117 agaagctgttcagccagcacctgagattccccagatgctttcccacactaatgaggcatt 58
Query: 421 tcggtgccctaagccctcagccaatgacctttgcccaccctggatgttcccagcctc 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 tcggtgccctaagccctcagccaatgacctttgcccaccctggatgttcccagcctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_g13.g1 MSMg01no306_g13.g1 CHROMAT_FILE:
MSMg01no306_g13.g1 PHD_FILE: MSMg01no306_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:11 2005
(302 letters)
>mm_chr10_82465536_82466237
Length = 702
Score = 569 bits (294), Expect = e-166
Identities = 300/302 (99%)
Strand = Plus / Plus
Query: 1 tcacttctaaaaatgtcatttaaaaataatttttttaattttaatcaccttgctgttttg 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 201 tcacttctaaaaatgtcatttaaaaataattttttaaattttaatcaccttggtgttttg 260
Query: 61 cctgcatgtatatctgcgtgaaggtgtcaagatcttggagttacagacagttgtaagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgcatgtatatctgcgtgaaggtgtcaagatcttggagttacagacagttgtaagctg 320
Query: 121 ccatacgggtgctgagaattgaacccagtattatggtatgtcttggttttaccactaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatacgggtgctgagaattgaacccagtattatggtatgtcttggttttaccactaagc 380
Query: 181 actgaaactcagttctcttggaaaatagactatcctgtcacgtggatgcattttaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgaaactcagttctcttggaaaatagactatcctgtcacgtggatgcattttaatgga 440
Query: 241 attctgctttctcgttggacagttctgaaaacaagttgtttttctgtcttttgttttatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attctgctttctcgttggacagttctgaaaacaagttgtttttctgtcttttgttttatg 500
Query: 301 tg 302
||
Sbjct: 501 tg 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
