Query= MSMg01no306_h09.b1 MSMg01no306_h09.b1 CHROMAT_FILE:
MSMg01no306_h09.b1 PHD_FILE: MSMg01no306_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:15 2005
(318 letters)
>mm_chr10_12947389_12948105
Length = 717
Score = 520 bits (269), Expect = e-152
Identities = 302/315 (95%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttgaacacatccagactttgtggggttctgtcaggcccacgtggatttgaaga 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattcttgaacacatcaagactttgtggggttctgtcaggcccacgtggatttgaaga 456
Query: 64 gatgctgt--gtttactcccgaacccacttgccaaagtagtttcttcatgaatgtgtctg 121
|||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatgctgtggg---actcaagaacccacttgccaaagtagtttcttcatgaatgtgtctg 399
Query: 122 tgtcctcctgctcactgacgtctgtctccacggtgtctgcatgggcgtctgcgtggcacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgtcctcctgctcactgacgtctgtctccacggtgtctgcatgggcgtctgcgtggcacc 339
Query: 182 ccaatgaacgttcggaggacgtccatcctctggagtcttcctttgtgttggggattctca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccaatgaacgttcggaggacgtccatcctctggagtcttcctttgtgttggggattctca 279
Query: 242 tcccagcatcttgctctgcagtgctgtcaaatgtgtttcttatggcaaccagcttccaag 301
|||| |||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 278 tcccggcatcttgctctgcagtgctgtcaaatgtgtttcacatggtaaccggcttccaag 219
Query: 302 aagcaaatgttgccg 316
|||||||||||||||
Sbjct: 218 aagcaaatgttgccg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_h09.g1 MSMg01no306_h09.g1 CHROMAT_FILE:
MSMg01no306_h09.g1 PHD_FILE: MSMg01no306_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:15 2005
(525 letters)
>mm_chr10_12792291_12793211
Length = 921
Score = 899 bits (465), Expect = 0.0
Identities = 509/525 (96%), Gaps = 4/525 (0%)
Strand = Plus / Plus
Query: 1 catgcatgtactaccatgtttggctctccacaactcgccttgagaactctcacatcatag 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgcatgtactactatgtttggctctccacaactcgccttgagaactctcacatcatag 260
Query: 61 ctcaggctggccttgaacttgcctcaatctccaaagttctaaaattagaggcctgtgtca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaggctggccttgaacttgcctcaatctccaaagttctaaaattagaggcctgtgtca 320
Query: 121 ccatgcctggctctgtcataaactacccaaacaagcttttgttgttgttgttgtattgtt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 321 ccatgcctggctctgtcataaactaccaaaacaagcttttgttgttgttgt---attgtt 377
Query: 181 tcgttttattttagaaggcgaaaaatgcgtggtaccattgttgccccattatgcatgtag 240
| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 378 ttgttttattttaaaaggcgaaaaatgcgtggtaccattgttgccc-attatgcatgtag 436
Query: 241 tacaattttgttggcaaaatgaggataaggtgcctgtgacttgagttagttccctggaac 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 437 tacaattttgttggcaaaatgaggataaggtgcctgtgacttgagttggttccctggaac 496
Query: 301 ctatataattagaggtggcaggaaagagcaggtatcacaaagttgtcctgatttgcacgt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 497 ctatataattagaggtggcaggaaagagcaggtgtcacaaagttgtcctgatttgcatgt 556
Query: 361 atgtaccttggtatgctgcccctctcccaccccccaactaataaagaaaataaatcttga 420
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct: 557 atgtaccttggtatgctgcccctcccccaccccctaactaataaaaaaaataaatcttga 616
Query: 421 gtagggtttgtataggctcaacttgctttgggtacttggcattttccacaccctcagcag 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 617 gtagggtttgtataggctcaacttgctttgggtacttggcattttccataccctcagcag 676
Query: 481 cccagcataggactgttaaagaactaactgacaactgcctgtcag 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cccagcataggactgttaaagaactaactgacaactgcctgtcag 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 921
Length adjustment: 10
Effective length of query: 515
Effective length of database: 911
Effective search space: 469165
Effective search space used: 469165
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
