Query= MSMg01no306_i23.b1 MSMg01no306_i23.b1 CHROMAT_FILE:
MSMg01no306_i23.b1 PHD_FILE: MSMg01no306_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:23 2005
(637 letters)
>mm_chr10_44519704_44520741
Length = 1038
Score = 1033 bits (534), Expect = 0.0
Identities = 555/562 (98%), Gaps = 1/562 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgattc-aattcttatggtaagaaacagtgggaaggacagtgtgctgctctg 63
|||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 562 gaattcagtgattcaaattattatggcaagaaacagtgggaaggacagtgtgctgctctg 503
Query: 64 agaaacaaaatgtttgctttgacctgtagcctaaaccgcttctgttcctctgctccgttg 123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 502 agaaacaaaatgtttgctttgacctgtaacctaaaccgcttctgttcctctgctccgttg 443
Query: 124 tttcttcactccacccagagcatcgatcctccaaagatttgtctgcacttgtcttgccat 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 442 tttcttcactccacccagagcatcgatcctccaaagatttgtctgcgcttgtcttgccat 383
Query: 184 gctcatttcccaccctccctagaaaacattgacacagagaactgttgttcttacccctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 382 gctcatttcccaccctccctagaaaacattgacacagagaactgttgttcttatccctcc 323
Query: 244 atgaaccctctaaccctccccctctgtgggatccacgttgtcaaaccatcggtgggtccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgaaccctctaaccctccccctctgtgggatccacgttgtcaaaccatcggtgggtccc 263
Query: 304 aagcgctttcctccactgcctttttagcagtgtgtttcttaacactgcttctaactggtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagcgctttcctccactgcctttttagcagtgtgtttcttaacactgcttctaactggtt 203
Query: 364 ttaaatatgcccacttagaaatactcttaggctaacacagaaattacaaaaatacttgtg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttaaatatgcccacttagaaatactcttaggctaacacagaaattacaaaaatacttgtg 143
Query: 424 gatgctcctgtgcacctatcacctggcttcccatagtaaccatcttccagggccatggta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gatgctcctgtgcacctatcacctggcttcccatagtaaccatcttccagggccatggta 83
Query: 484 gactctttaagcttttcaaacctgatcatttgctccatgacttcgtcttgtatttgcttt 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 82 gactctttaagcttttcaaacctgatcatttgctccctgacttcgtcttgtatttgcttt 23
Query: 544 gcttggcctctgtatatctcta 565
||||||||||||||||||||||
Sbjct: 22 gcttggcctctgtatatctcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_i23.g1 MSMg01no306_i23.g1 CHROMAT_FILE:
MSMg01no306_i23.g1 PHD_FILE: MSMg01no306_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:23 2005
(678 letters)
>mm_chr10_44496902_44497979
Length = 1078
Score = 1249 bits (646), Expect = 0.0
Identities = 670/678 (98%)
Strand = Plus / Plus
Query: 1 aatgtcatgctgcctgcagctggatgtggtctttatcgatagttgcctggagcggacatc 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 201 aatgtcatgctgcctgcagctggatgtggtttttatcgatagttgcctggagtggacatc 260
Query: 61 tgtatcatttccccttataccagtgcttatgtaacatccgagaaattaagtaaaacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatcatttccccttataccagtgcttatgtaacatccgagaaattaagtaaaacttaa 320
Query: 121 agtaggagaacggaaagttcagcagttgcctagggtggatgagtaggatgctttcaggac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaggagaacagaaagttcagcagttgcctagggtggatgagtaggatgctttcaggac 380
Query: 181 cagtcatccacaggggaagcaccagggcacagtcagggaagggtcttctgcaaatccctt 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 cagtcatccacaggggaagcaccagggcacagtcaggaaagggtcttctgcaaatccctt 440
Query: 241 gacacccattggtggtttccagggtatagctgagaggatttatgtttttagagataatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacacccattggtggtttccagggtatagctgagaggatttatgtttttagagataatgt 500
Query: 301 ctttataaaaatgaaatattcacaaaatagcataggaaacgccaagttgagtcccctccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttataaaaatgaaatattcacaaaatagcataggaaacgccaagttgagtcccctccg 560
Query: 361 gggataatcggacacaaacagaaacaaaacaagtaatatactttgagtcgtgagaattaa 420
||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||
Sbjct: 561 gggataatcggacacaaacggaaacaaaacaagtaatatgccttgagtcgtgagaattaa 620
Query: 421 gtcagaaaatacatggtcaatgccaagcaagaggcctagtatttggtgcttcaaagaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcagaaaatacatggtcaatgccaagcaagaggcctagtatttggtgcttcaaagaaag 680
Query: 481 tagctgtgaccatctgcttcctctccctccttctcaccattgtcagacatcacaatcgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagctgtgaccatctgcttcctctccctccttctcaccattgtcagacatcacaatcgtc 740
Query: 541 ataagttacttgtgtacacatgtggcaggactggtgatggtccatctcaggatgcccaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataagttacttgtgtacacatgtggcaggactggtgatggtccatctcaggatgcccaca 800
Query: 601 ggaagtgtttcattcatattatttcatgagggacaaagtctttttctctggccgcatctt 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 ggaagtgtttcattcatattatttcatgaggggcaaagtctttttctctggccgcatctt 860
Query: 661 agtggaaatttctactgc 678
||||||||||||||||||
Sbjct: 861 agtggaaatttctactgc 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
