Query= MSMg01no307_a21.b1 MSMg01no307_a21.b1 CHROMAT_FILE:
MSMg01no307_a21.b1 PHD_FILE: MSMg01no307_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:00 2005
(695 letters)
>mm_chr10_98657357_98658451
Length = 1095
Score = 1216 bits (629), Expect = 0.0
Identities = 676/695 (97%), Gaps = 8/695 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcctccctccccctctcttccctccctccctccttcctcttcccctcttcctc 64
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattctccctccctccccctctcttccctccctccctccttcctcttcccctctttctc 264
Query: 65 ccccaccccctctgtgtctcccccttttaagaacacttacttattttggcagtgctggtg 124
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctccaccccctctgtctctcccccttttaagaacacttacttattttggcagtgctggtg 324
Query: 125 tacacctttaatctcaggactcaggaggcagaggcaaacagatctctgtgagttcgaggc 184
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 cacacctttaatctcaggactcaggaggcagaggcaaacagatctctgttagttcgaggc 384
Query: 185 cagcctggtctacatagagtgagttccaggacagccagagctatacagagaaaccctttc 244
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 385 cagcctggtctacatagagtgagttccaggacagccagaactatacagagaaaccctttc 444
Query: 245 tcgaaaaacaaaaaatacgaacaacaaaactgaaaacccctcttatttacaccaactaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcgaaaaacaaaaaatacgaacaacaaaactgaaaacccctcttatttacaccaactaag 504
Query: 305 tacacaaactaagaattttagtgctaagttatcattccactccctagtgactagtcagtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacacaaactaagaattttagtgctaagttatcattccactccctagtgactagtcagtg 564
Query: 365 aacatccctgacaccc----acacaccgggcactttcactgtgccctctcatgaggagat 420
||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacatccctga-a---ggggagacaccgggcactttcactgtgccctctcatgaggagat 620
Query: 421 agatcacctgctgccacctcagatgacaggttgagctgtgtgctaactgggtagtccccg 480
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 621 agatcacctgctgccacctcagacgacaggttgagctgtgtgctaactgggtagtccctg 680
Query: 481 cagtacagatcagtataaatgtcacggatagacaaacggcccgagcctgctagtggttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagtacagatcagtataaatgtcacggatagacaaacggcccgagcctgctagtggttga 740
Query: 541 gagtcaagaaaaagggagaggtgtgaccatttgggaattaaaaccataagtgagccagtg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 741 gagtcaagaaaaagggagaggtgtgaccatttgggaattaaaaccataagtgagccggtg 800
Query: 601 atttaaagctgggcataaaggagggtacgggatgaaaccgtggaagccactcagaaagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atttaaagctgggcataaaggagggtacgggatgaaaccgtggaagccactcagaaagtt 860
Query: 661 ctggatgtggctgggaatgtcagctggtctcttag 695
|||||||||||||||||||||||||||||||||||
Sbjct: 861 ctggatgtggctgggaatgtcagctggtctcttag 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_a21.g1 MSMg01no307_a21.g1 CHROMAT_FILE:
MSMg01no307_a21.g1 PHD_FILE: MSMg01no307_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:00 2005
(299 letters)
>mm_chr10_98836796_98837493
Length = 698
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 1 ctgaaactgggattacctcgtgattatccatcccccagtctgtaaaaggaccactgtgag 60
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 484 ctgaaactgggattacctcgtgattatccatcccccagtctgtaagagga-gactgtgag 426
Query: 61 aaaaatattctggagaaagaatttcctcttaaacgtaatttggtgctactgagcagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaaaatattctggagaaagaatttcctcttaaacgtaatttggtgctactgagcagaaaa 366
Query: 121 aaaaaaggctaataaatacaacattcattattgaagacccacttgagcccttactgcact 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaaataggctaataaatacaacattcattattgaagacccacttgagcccttactgcact 306
Query: 181 gtgcttaggaaactcttacatacctgtaggcacttgatatctcaggagagctgagcatgc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 305 gtgcttaggaaactcttacatacctgtaggcacttgatatctcaggagagctgaacatgc 246
Query: 241 gcacaccttttactgttggccgtggtggtttgttggttgattggt 285
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 245 gcacaccttttactgttggccatggtggtttgttggttgattggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 698
Length adjustment: 9
Effective length of query: 290
Effective length of database: 689
Effective search space: 199810
Effective search space used: 199810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
