Query= MSMg01no307_c01.b1 MSMg01no307_c01.b1 CHROMAT_FILE:
MSMg01no307_c01.b1 PHD_FILE: MSMg01no307_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:06 2005
(679 letters)
>mm_chr10_9500332_9501410
Length = 1079
Score = 1224 bits (633), Expect = 0.0
Identities = 666/677 (98%), Gaps = 4/677 (0%)
Strand = Plus / Minus
Query: 6 aatttatttctttgaca-aatttttt-catacaatatattttgatcatgtttctctttcc 63
||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 943 aatttatttctttgaaataattttttccatacaatatattttgatcatgtttctctttcc 884
Query: 64 cccaggcatagaaagtgaaggttttttctcttgccatggcctcgacaatgctgcagagct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 cccaggcatagaaagtgaaggttttttctcttgccatggcctcgacaatgctgcagagct 824
Query: 124 agatgacccgagcaactttctaatacaattatctattgtgtttctcatagcattgtacca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 agatgacccgagcaactttctaatacaattatctattgtgtttctcatagcattgtacca 764
Query: 184 gcactataattttccttatttaatcagcttagtaatctcatgaactgttatttatttatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gcactataattttccttatttaatcagcttagtaatctcatgaactgttatttatttatt 704
Query: 244 tattttacagatgagagacctgagtataagttatatgttggcgtcacagctaaataataa 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 703 tattttacagatgagagacctgagtataagttatatgttggcttcacagctaaataataa 644
Query: 304 aacagaatatgaaatacagtggtctagttcagctgtctatactatgttatctcttagaac 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 643 aacagaatatgaaatacagtggtctagttcagctgtctatactatgttatctcttaaaac 584
Query: 364 aatttggcaaaagctataaaggttttatgtacatttatatacatatataaaatgtccaat 423
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aatttggtaaaagctataaaggttttatgtacatttatatacatatataaaatgtccaat 524
Query: 424 aagaacatattatgcaattcatagataatctggccatggccctactctgctgcagagtaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aagaacatattatgcaattcatagataatctggccatggccctactctgctgcagagtaa 464
Query: 484 cctaggaaggaaagactcataatcaaattctgtgcatgattttttttaa-ttataaggct 542
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 463 cctaggaaggaaagactcataatcaaattctgtgcatga-tttttttaagttataaggct 405
Query: 543 tttaaaaaaagtaatatcatttaaatttttaagagagctttattgaagggaaagagtaag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tttaaaaaaagtaatatcatttaaatttttaagagagctttattgaagggaaagagtaag 345
Query: 603 ttgtacctgaatgccaactcccgtccaccacttcggtgtccattgcctgagcatgatata 662
|| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 344 ttctacctgaatgccaactctcgtccaccactttggtgtccattgcctgagcatgatata 285
Query: 663 cagttcctagatgtcta 679
|||||||||||||||||
Sbjct: 284 cagttcctagatgtcta 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_c01.g1 MSMg01no307_c01.g1 CHROMAT_FILE:
MSMg01no307_c01.g1 PHD_FILE: MSMg01no307_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:06 2005
(637 letters)
>mm_chr10_9447431_9448467
Length = 1037
Score = 1178 bits (609), Expect = 0.0
Identities = 630/637 (98%)
Strand = Plus / Plus
Query: 1 actagaagcccctaggttccttttctataaaagcaatattgtatagactccaatatttta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 actagaagcccctaggttccttttctataaaagcaatattgtatagactctaatatttta 260
Query: 61 tgtattgatgctttgaagggtttatattattgtcttgtttgttttgccagcttactttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtattgatgctttgaagggtttatattattgtcttgtttgttttgccagcttactttat 320
Query: 121 atactagtcacagcaattttctcccgtttttgtttcttaatgaactacctcaagatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactagtcacagcaattttctcccgtttttgtttcttaatgaactacctcaagatgcaa 380
Query: 181 tggttaaagacaacagttagccactttctgggggactgtgggctttgaccacagcccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 tggttaaagacaacagttagccactttctgggggactgtgggctttgaccacagctcagt 440
Query: 241 gggaaatgtaaggcttctgctgcacagggcatatgacagaggatcaaggcgcatctcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 gggaaatgtaaggcttctgctgcacagggcatatgacagaggatcaaggcgcagctcaga 500
Query: 301 tgctatgcatggctgtgagctggcctgacagtttatacgatcttcccggactctcggggc 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tgctatgcatggctgtgagctggcctgacagtttatacgatcttcttggactctcggggc 560
Query: 361 tttatctctctccaacttgatgttttagagcttcagaaggaagcttttaggacttttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttatctctctccaacttgatgttttagagcttcagaaggaagcttttaggacttttgaa 620
Query: 421 tgtagcgttctaaaatcacaggtattcaattactctgtgttctgcccagcaagccatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtagcgttctaaaatcacaggtattcaattactctgtgttctgcccagcaagccatata 680
Query: 481 tgtccatcccagaatacagcgggaaaagcagctcagccagccaactacaatgtccactgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtccatcccagaatacagcgggaaaagcagctcagccagccaactacaatgtccactgg 740
Query: 541 cagtgaacagactccttgcttgtttcccgggtcttctgcagattgagtatccttttaaaa 600
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 741 cagtgaacagactccttgcttgtttcccgggtcttccgcagattgagtatctttttaaaa 800
Query: 601 tgctgtggaagtcttttctggcctcagtctcacaaag 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgctgtggaagtcttttctggcctcagtctcacaaag 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
