Query= MSMg01no307_m11.b1 MSMg01no307_m11.b1 CHROMAT_FILE:
MSMg01no307_m11.b1 PHD_FILE: MSMg01no307_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:55 2005
(370 letters)
>mm_chr10_49260845_49261614
Length = 770
Score = 615 bits (318), Expect = e-180
Identities = 350/364 (96%), Gaps = 7/364 (1%)
Strand = Plus / Minus
Query: 5 gaattcctcgttttctcccaaatttcggtttcagtatgggagatagtttgggacattctg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaattcctcgttttatcccaaatttcggtttcagtatgggagatagtttgggacattctg 628
Query: 65 gcttaatatagtttgaatatcatctgaagatattattagcatgagagtgctgatgaatat 124
||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 627 gcttagtatagtttgaatatcatctgaagatattattagcatgagagtgctgat--acac 570
Query: 125 atctgtcttctaatacgctgactaatttttatcagctatattttatcataataaattcca 184
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 a-----cttctaatacactgactaatttttatcagctatattttatcataataaattcca 515
Query: 185 gctcatttataacatacgtgaatatgataaaagaaatttagattgaagatagacctaata 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 514 gctcatttataacatacgtgaatatgataaaagaaatttagatagaagatagacctaata 455
Query: 245 gtgtacctaccacatacaatgactacagtacccccaagtgagcactgcattttaataaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtgtacctaccacatacaatgactacagtacccccaagtgagcactgcattttaataaga 395
Query: 305 caccaatgccataattgaaaactagacaaattttaataacaatagacaagataaataaat 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 caccaatgccatgattgaaaactagacaaattttaataacaatagacaagataaataaat 335
Query: 365 ttaa 368
||||
Sbjct: 334 ttaa 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_m11.g1 MSMg01no307_m11.g1 CHROMAT_FILE:
MSMg01no307_m11.g1 PHD_FILE: MSMg01no307_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:55 2005
(676 letters)
>mm_chr10_49201474_49202549
Length = 1076
Score = 1220 bits (631), Expect = 0.0
Identities = 664/675 (98%), Gaps = 1/675 (0%)
Strand = Plus / Plus
Query: 1 catagcatgttaattaaatttacaaacataaacacaacttgtggaaagaaggaaggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catagcatgttaattaaatttacaaacataaacacaacttgtggaaagaaggaaggataa 260
Query: 61 aaaggacaaagaaaaactagtgctgaacaaaatattgaataaagaagaagacatgcaatg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggacaaagaaaaactaatgctgaacaaaatattgaataaagaagaagacatgcaatg 320
Query: 121 agattaaacaaggagtttctgaactgtttattgttataaatattatactttaaaataggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattaaacaaggagtttctgaactgtttattgttataaatattatactttaaaataggg 380
Query: 181 tattcacagacttgacacaagagaaacaacactcagtaaatcaaaacaccccaactacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattcacagacttgacacaagagaaacaacactcagtaaatcaaaacaccccaactacct 440
Query: 241 gcagactaaaagaagtgccctaattcaaagagcagaaaattactgaaaatccatcaccat 300
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagactaaaaaaagtgtcctaattcaaagagcagaaaattactgaaaatccatcaccat 500
Query: 301 gataagcaaagaccttatctaaaagcttaaatctaggcattcacctttgtcagaatactg 360
|||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 501 gataagcaaagaccttatctaaaagcttaaatctgggcatttagttttgtcagaatactg 560
Query: 361 agaaattgttctattactttctgattcagctaataaactttgacaaaaatcagtgttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaattgttctattactttctgattcagctaataaactttgacaaaaatcagtgttttt 620
Query: 421 aagatgcaggattctagtattaatataacaaatataaatgctaattttctgtctttagga 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 aagatgcaggattctagtattaatataacaaatataaatgttaattttctgtctttagga 680
Query: 481 gtgctgtttaatattttaaaatacttattatgaaatcgattctgtcatctaaaaaataaa 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 gtgctgtttaatattttaaaatacttattatgaaattgattctgtcatctaaaaaataaa 740
Query: 541 gaacaaaatgagctggacttcaattatattccagtactgtgtagcaagtttatctgaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaacaaaatgagctggacttcaattatattccagtactgtgtagcaagtttatctgaaaa 800
Query: 601 ctatttacttgctggcatcataagagtttgaaaaacaaacaaacaaacaaaacaaaaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctatttacttgctggcatcataagagtttgaaaaacaaacaaacaaacaaaacaaaaaaa 860
Query: 661 aaaaccaaaagatga 675
| | |||||||||||
Sbjct: 861 aca-ccaaaagatga 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
