Query= MSMg01no308_k06.b1 MSMg01no308_k06.b1 CHROMAT_FILE:
MSMg01no308_k06.b1 PHD_FILE: MSMg01no308_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:01 2005
(582 letters)
>mm_chr10_109729460_109730444
Length = 985
Score = 872 bits (451), Expect = 0.0
Identities = 548/585 (93%), Gaps = 13/585 (2%)
Strand = Plus / Plus
Query: 6 gaattccttcctgttacag--tgtacctgaattcataccaaatggtcctgcctgggaaca 63
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccttcctg--acagagtgtacctgaattcataccaaatggtcctgcctgggaaca 263
Query: 64 tttgatttcaagtgaccttaatcaatacaaattaaagcttcaatttctctctttgagaaa 123
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 tttgatttcaagtgacattaatcaatacatattaaagcttcaatttctctctttgagaag 323
Query: 124 taaaaattgcgtaaaatgaatgccagttctaaacaaataatagaatgggctaacacatgt 183
|||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 324 taaaaattgcgtaaaatgaatgccagttctaagcaaataatagaatgagctgacacatgt 383
Query: 184 gtatgtacagatatatattgattttcttagagatattttcaacctcacttgggtttatgt 243
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 384 gtatgtacagatatatattgattttcttagagatattttcaacctcacatgggtttgtgt 443
Query: 244 tttatccaaaaaaatgaatatcagaatacctagcagactataaacaaagttttacataat 303
||||||||||||||||||| |||||||||||| ||||| | ||| |||||||||||||||
Sbjct: 444 tttatccaaaaaaatgaatgtcagaatacctaacagacaaaaaataaagttttacataat 503
Query: 304 ttttccacaaataaaacattctttttagatagcatcaactagaaaaaaaagagtgaattc 363
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttttccacaaataaaaccttctttttagatagcatcaactagaaaaaaaagagtgaattc 563
Query: 364 agactcacatatcccccccccatcttttgatataatcaggttatttttttcaaataaaat 423
|||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 564 agactcacatattttccctccatcttttgatataatcaggtt--ttttttcaaataaaat 621
Query: 424 attcagtatttcaaattgaaaaaaa---gaaaattagtcattagcaaactgcctagaaga 480
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 622 attcagtatttcaaattgaaaaaaaaaagaaaattagtcactagcaaactgcctagaaga 681
Query: 481 aacagctttggaggtgatgtttataacaaagaggttttccccgagctatgctgaaagaga 540
|| ||||||||||||||||||||||||||||||| |||||| |||||||||| ||| |||
Sbjct: 682 aatagctttggaggtgatgtttataacaaagaggctttccc-gagctatgctaaaacaga 740
Query: 541 aagggtaaattaaaatgtgttct---gtcttgactttctacacag 582
||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 741 aagggtaaattaaaatgtgttcttctgtcttgacttactacacag 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 985
Length adjustment: 10
Effective length of query: 572
Effective length of database: 975
Effective search space: 557700
Effective search space used: 557700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_k06.g1 MSMg01no308_k06.g1 CHROMAT_FILE:
MSMg01no308_k06.g1 PHD_FILE: MSMg01no308_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:01 2005
(216 letters)
>mm_chr10_109893543_109894158
Length = 616
Score = 410 bits (212), Expect = e-119
Identities = 215/216 (99%)
Strand = Plus / Minus
Query: 1 cctttccttttctccagggggaagttttgtgttgaagttcaacaaaggtcctgggtcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cctttccttttctccagggggaagttttgtgttgaagttcaacaaaggtcctgggtcggg 357
Query: 61 tcgtatacgaagtgatgaagagcattggttggagtggagaacctattgggttgtaatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcgtatacgaagtgatgaagagcattggttggagtggagaacctattgggttgtaatttc 297
Query: 121 ttaagttccacctgtgcatggtagtagcaaactatgcatgttgcttatcatggtctgttt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tttagttccacctgtgcatggtagtagcaaactatgcatgttgcttatcatggtctgttt 237
Query: 181 ctgatgtatgtgctcactgagaagtagctttgagtt 216
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ctgatgtatgtgctcactgagaagtagctttgagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
