Query= MSMg01no309_c21.b1 MSMg01no309_c21.b1 CHROMAT_FILE:
MSMg01no309_c21.b1 PHD_FILE: MSMg01no309_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:42 2005
(324 letters)
>mm_chr10_82946629_82947352
Length = 724
Score = 580 bits (300), Expect = e-170
Identities = 315/320 (98%)
Strand = Plus / Plus
Query: 4 ggaattccagttttatgtttgatgccaaattctttacaaaatgaagtaaaattttgctag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagttttatgtttgatgccaaattctttacaaaatgaagtaaaattttgctag 263
Query: 64 aataggatgaccagttatctgacttaataagtttaggcaatcctatttggcaggtactgt 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 264 aataggatgaccagttatctgacttaataagtttaggcaatcccatttggcaggtacggt 323
Query: 124 ggcaccaggactacacttgaagtttggggtttttaagatgcagccaagagctatgttaga 183
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 ggcaccaggactacacatgaagtttggggttttaaagatgcagccaagagctatgttaga 383
Query: 184 ggtttataaaggcaaaaaacacaaggttacatttttgggggtggttaagggaaaatagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtttataaaggcaaaaaacacaaggttacatttttgggggtggttaagggaaaatagat 443
Query: 244 ctttgtgtgagcaggacttagcttttgcaacatattttgtatatttcccacttatcttaa 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 ctttgtgtgagcaggacttagcttttgcaacatattttgtagatttcccacttatcttaa 503
Query: 304 gcaagctagcatttttgtac 323
||||||||||||||||||||
Sbjct: 504 gcaagctagcatttttgtac 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_c21.g1 MSMg01no309_c21.g1 CHROMAT_FILE:
MSMg01no309_c21.g1 PHD_FILE: MSMg01no309_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:42 2005
(652 letters)
>mm_chr10_83044153_83045203
Length = 1051
Score = 1118 bits (578), Expect = 0.0
Identities = 645/696 (92%), Gaps = 44/696 (6%)
Strand = Plus / Minus
Query: 1 tctttatgaaggcagcatccattgcttttgtttatttcagggttgctgctcctttcctta 60
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 864 tctttatgaaggcagcatccattgcttttgtttatttcagggttactgctgttttcctta 805
Query: 61 tggtactggggaatgaacctggggcctttggcacagcagaaaagcccacttgcaagaagc 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 804 tggtactggggaatgaacctggggcctttggcacagcagaaaagcctacttgcaagaagc 745
Query: 121 tacatctccagcccaataaaacagcattcctaaaaactactggtaggaaacaattgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacatctccagcccaataaaacagcattcctaaaaactactggtaggaaacaattgtgta 685
Query: 181 gtatttccagagtgttagacagcacgtgccagaaatctgaagtactcattctcatccatt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtatttctagagtgttagacagcacgtgccagaaatctgaagtactcattctcatccatt 625
Query: 241 attctagaaacttcttttcagggatattttctttcagaaatggtctccaattagatatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attctagaaacttcttttcagggatattttctttcagaaatggtctccaattagatatgt 565
Query: 301 tatctgtggctctgttcataagaacagaagatgagaaaactaaaatacccatgagttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatctgtggctctgttcataagaacagaagatgagaaaactaaaatacccatgagttagt 505
Query: 361 tggggattaaacaagtcccctttatgattaactcttaaaaagtggctaggaagggatatg 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 tggggattaaacaagtcccctttatggttaactcttaaaaagtggctaggaagggatatg 445
Query: 421 ttcagacatcaagcacacaatgtaaaccaatactgctctgttttgcagtaaaaagcagca 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 ttcagacatcaagcacacaatgtaaaccaatactgctctattttgcagtaaaaagcagca 385
Query: 481 ctgtgtaaatgtgtgaagacacacatgtctactgtgaagggttagg-------------- 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgtgtaaatgtgtgaagacacacatgtctactgtgaagggttaggaagggccctatact 325
Query: 527 ------------------------------caaggaactgggaaaagacatgatgggatg 556
||||||||||||||||||||||||||||||
Sbjct: 324 acactgctcactaaagctcctgcctccaggcaaggaactgggaaaagacatgatgggatg 265
Query: 557 gcagatgcacctgacactgtgtaagtgcttcaacaccagcatgttttggtgtgtatatta 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcagatgcacctgacactgtgtaagtgcttcaacaccagcatgttttggtgtgtatatta 205
Query: 617 ttataaaataaaataatctaagctacaatgatcatt 652
||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttataaaataaaataatctaagctacaatgatcatt 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
