Query= MSMg01no309_g24.b1 MSMg01no309_g24.b1 CHROMAT_FILE:
MSMg01no309_g24.b1 PHD_FILE: MSMg01no309_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:01 2005
(324 letters)
>mm_chr10_39227030_39227753
Length = 724
Score = 580 bits (300), Expect = e-170
Identities = 315/320 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagagcagagttgtaggtcccctgcagctcctcacactgtgtcaggggcagagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggaattcagagcagagttgtaggtcccctgcagctcctcacactgtgtcaggggcagagg 464
Query: 64 caaaagtggaccgcttcatgaatgaacagcagtgggatgagagagggcaggaggaggcgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caaaagtggaccgcttcatgaatgaacagcagtgggatgagagagggcaggaggaggcgg 404
Query: 124 agcacagtcagagtgaggcgacctttggagagaggctcctggcacacagcttttgatgct 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 403 agcacagtcagagtgaggcgaccttaggagagaggctcctggcacacagcttttgatgct 344
Query: 184 gagaaaatcaacaccacccacaggatgagtaactttactaggactttaaggaactttact 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gagaaaatcaacaccatccacaggatgagtaactttactaggactttaaggaactttact 284
Query: 244 agattctcagcagacagtgaatcccctgaggagccagggcagctgattaggagttttcct 303
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agattctcggcagacagtgaatcccctgaggagccagggcagctgattaggagttttccg 224
Query: 304 cacataactgctagaacctc 323
||||||||||||||| ||||
Sbjct: 223 cacataactgctagagcctc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_g24.g1 MSMg01no309_g24.g1 CHROMAT_FILE:
MSMg01no309_g24.g1 PHD_FILE: MSMg01no309_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:01 2005
(294 letters)
>mm_chr10_39159619_39160312
Length = 694
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%), Gaps = 1/293 (0%)
Strand = Plus / Plus
Query: 1 attgattcaggtgttcccactgattagaaaatgaacttcagtttgggagatgaacaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 attgattcaggtgttcccactgattagaaaatgaacttcagtttgggagatgaacaggag 261
Query: 61 ctagctgggaggtagaggcaggcagacgtcttcagttgaaggccagcctggtctacatag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 ctagctgggaggtagaggcaggcagatgtcttcagttgaaggccagcctggtctacatag 321
Query: 121 tgaactccaggccaaccaaggctacatagacagagtccctgtctgaaaaaaaaccaaaca 180
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 322 tgaactccaggccaaccaaggctacatagacagagtccctgtctggaaaaaaac-aaaca 380
Query: 181 ataaatgttccttgaaaaacaaaacattccttagaggtggaagaaaagctgtgagtctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaatgttccttgaaaaacaaaacattccttagaggtggaagaaaagctgtgagtctcg 440
Query: 241 ttcagagatttctaaagtgctggtcacaattgcaccagttccctggctgcctg 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagagatttctaaagtgctggtcacaattgcaccagttccctggctgcctg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
