Query= MSMg01no309_n24.b1 MSMg01no309_n24.b1 CHROMAT_FILE:
MSMg01no309_n24.b1 PHD_FILE: MSMg01no309_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:34 2005
(324 letters)
>mm_chr10_91997539_91998262
Length = 724
Score = 615 bits (318), Expect = e-180
Identities = 318/318 (100%)
Strand = Plus / Plus
Query: 5 gaattcctgcaagatgtcatgtccatagtgtaactgaccactcagttttttatgcacatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgcaagatgtcatgtccatagtgtaactgaccactcagttttttatgcacatg 264
Query: 65 tttcctcaaaagtccttcacgtttctaagagcaccgtgtaatcatcaggacacaactggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcctcaaaagtccttcacgtttctaagagcaccgtgtaatcatcaggacacaactggt 324
Query: 125 atgaaatatttcagaagaagcaggttcccagaaactattcactgaaaacagcacaaactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgaaatatttcagaagaagcaggttcccagaaactattcactgaaaacagcacaaactt 384
Query: 185 caaagtcaatccaggaatgattttgaagtcatcataagatgaggatatggggatgtgatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaagtcaatccaggaatgattttgaagtcatcataagatgaggatatggggatgtgatt 444
Query: 245 cagttaataaagagcttatctagcatgtacaaggccctgtgtttgatccctagcaccata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagttaataaagagcttatctagcatgtacaaggccctgtgtttgatccctagcaccata 504
Query: 305 tataagccaggtagagtg 322
||||||||||||||||||
Sbjct: 505 tataagccaggtagagtg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_n24.g1 MSMg01no309_n24.g1 CHROMAT_FILE:
MSMg01no309_n24.g1 PHD_FILE: MSMg01no309_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:34 2005
(653 letters)
>mm_chr10_92091360_92092412
Length = 1053
Score = 1251 bits (647), Expect = 0.0
Identities = 651/653 (99%), Gaps = 2/653 (0%)
Strand = Plus / Minus
Query: 1 cttgggccattcattctcggttgttttctacttggttttggtatattaaagacaggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 cttgggccattcattctcggttgttttctacttggttttggtatattaaagacaggagat 935
Query: 61 agttcatgatccaaagtccaatacaaccaaccacacacacacacacacacacacacacac 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 934 agttcatgatccaaagtccaatacaaccaac--cacacacacacacacacacacacacac 877
Query: 121 acacacacacacacacacacacaaatttacatcttgagaacttgggttgcagtttttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 acacacacacacacacacacacaaatttacatcttgagaacttgggttgcagtttttatg 817
Query: 181 agaagagaaaagtagctttctagggagtaggaggatgtagctgggaaatttctgagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 agaagagaaaagtagctttctagggagtaggaggatgtagctgggaaatttctgagcttg 757
Query: 241 gttattgtctggaagcactgtagagtcctgagcagtctgaaaagcccttatcacttcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gttattgtctggaagcactgtagagtcctgagcagtctgaaaagcccttatcacttcagg 697
Query: 301 atccaattaaaagggaattatttccccattccacagctaaggaaatggatcaacaaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atccaattaaaagggaattatttccccattccacagctaaggaaatggatcaacaaagag 637
Query: 361 gccaaatgtctgttgtaaaacctggctgatgtaaccccccagacaggggagctgggctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gccaaatgtctgttgtaaaacctggctgatgtaaccccccagacaggggagctgggctta 577
Query: 421 gcagtctcctctccacctcctgggatggagttattttcttcttagagtcatctgtcagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gcagtctcctctccacctcctgggatggagttattttcttcttagagtcatctgtcagtt 517
Query: 481 ctcagagcagtgagcctacagaaatcaacctttgatagactcgtgccagcaaataaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctcagagcagtgagcctacagaaatcaacctttgatagactcgtgccagcaaataaaaat 457
Query: 541 tagaccacgtttatccagttgcaggagatggaaaagaccacgatcttacaatctgtcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tagaccacgtttatccagttgcaggagatggaaaagaccacgatcttacaatctgtcatg 397
Query: 601 cttcctagtagcttgtctttgtctggtctctagccacacaatccttgagcttc 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cttcctagtagcttgtctttgtctggtctctagccacacaatccttgagcttc 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
