Query= MSMg01no311_b18.b1 MSMg01no311_b18.b1 CHROMAT_FILE:
MSMg01no311_b18.b1 PHD_FILE: MSMg01no311_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:52 2005
(265 letters)
>mm_chr10_30405665_30406329
Length = 665
Score = 505 bits (261), Expect = e-147
Identities = 264/265 (99%)
Strand = Plus / Plus
Query: 1 tttaaattagattactgactgattgaaattatccactgcttttatggttaaattaggacc 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaattagattactgacagattgaaattatccactgcttttatggttaaattaggacc 260
Query: 61 aggagccaaagcaaagaaagctgggatcttgtagttatataatcagaaatctagaaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagccaaagcaaagaaagctgggatcttgtagttatataatcagaaatctagaaattt 320
Query: 121 cacaaatatcccaagcataacatcgccattctcagattactcaagagaagtagctgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaatatcccaagcataacatcgccattctcagattactcaagagaagtagctgactt 380
Query: 181 tgcaaaatgtagtggagacagagacaggttaaggttgtcatgtatttaacccacaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcaaaatgtagtggagacagagacaggttaaggttgtcatgtatttaacccacaggaga 440
Query: 241 atctgagtgcatttcaagcagtgtt 265
|||||||||||||||||||||||||
Sbjct: 441 atctgagtgcatttcaagcagtgtt 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no311_b18.g1 MSMg01no311_b18.g1 CHROMAT_FILE:
MSMg01no311_b18.g1 PHD_FILE: MSMg01no311_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:52 2005
(286 letters)
>mm_chr10_30575139_30575824
Length = 686
Score = 495 bits (256), Expect = e-144
Identities = 278/288 (96%), Gaps = 5/288 (1%)
Strand = Plus / Minus
Query: 1 tcagtgtgctttggtttgggatgattcttaccagacttttgggtaacttcagggggagcc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcagtgcgctttggtttgggatgattcttaccagacttttgggtaacttcagggggagcc 241
Query: 61 aaaaggaacagtgagagaaatccaggcacaatattaaacaaaagaaaactcacactgagg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 240 aaaaggaacagtgagagaaatccaggcacaatattaaacaaaagaaaactcaaactgagg 181
Query: 121 gaaaact-----taaaaagatttttaaaaaggaacttgaacaggaacctcagaggaaagg 175
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaaaacttgaaataaaaagatttttaaaaaggaacttgaacaggaacctcagaggaaagg 121
Query: 176 ctcaccaacagaatacaagagatggaagagagaatctcagacattgatgataagatagaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctcaccaacagaatacaagagatggaagagagaatctcagacattgatgataagatagaa 61
Query: 236 gaaatggatacctcttccaaagaaaatgttacatctaaagaaaaaaga 283
|||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 60 gaaacggatacctcagccaaagaaaatgttacatctaaagaaaaaaga 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
