Query= MSMg01no312_a04.b1 MSMg01no312_a04.b1 CHROMAT_FILE:
MSMg01no312_a04.b1 PHD_FILE: MSMg01no312_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:00 2005
(654 letters)
>mm_chr10_109915775_109916828
Length = 1054
Score = 1160 bits (600), Expect = 0.0
Identities = 636/648 (98%)
Strand = Plus / Minus
Query: 7 gaattctttgcttgccatttcatttacttcactccatcagaggaggccattattgtggaa 66
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 gaattctttgcctggcatttcatttacttcactccatcagaggaggccattattgtggaa 931
Query: 67 ttatcagttttcagaggagtcatgttgcctaattttttcatatatttttgttgttgtttt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 ttatcagttttcagaggagtcatgttgcctaattttttcatatatttttgttgttgtttt 871
Query: 127 tgttgttactgttgtttgtttgcgagggtactttggatcagaagttaggccattgtttag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 tgttgttactgttgtttgtttgcgagggtactttggatcagaagttaggccattgtttag 811
Query: 187 attgttttattaatgagcctccccctgattcccaggaaaagtactttcagtgttcaagta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 attgttttattaatgagcctccccctgattcccaggaaaagtactttcagtgttcaagta 751
Query: 247 ggactaagctctaacagctgaggatgtagctctgtagttttcctctttgcccatgtgctc 306
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggactaggctctaacagctgaagatgtagctctgtagttttcctctttgcccatgtgctc 691
Query: 307 agagttctgcactcagtcatcagcagtggtctgactgcagaataggaataatcacagctg 366
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 690 agagttctgcgctcagtcatcagcagtgatctgactgcagaataggaataatcacagctg 631
Query: 367 ctgaataacctcagtgtggaaaacacagcaatagtctattaaaaacaatcgccctttcaa 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ctgaataagctcagtgtggaaaacacagcaatagtctattaaaaacaatcgccctttcaa 571
Query: 427 ctccactactttcagagaaggaaatgaagatggaaggtcctatacataataaaatatttg 486
||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 570 ctccactacttccagggaaggaaatgaagatgggaggtcctatacataataaaatatttg 511
Query: 487 ttactgaggctccgaatgcaatggaaacaagcagagtagggaagagaatcatgttagaga 546
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttactgaggctctgaatgcaatggaaacaagcagagtagggaagagaatcatgttagaga 451
Query: 547 aaaataaatgaggcagtgagcgataaagatcaagcagggagacaggaaagttcttgctaa 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaaataaatgaggcagtgagcgataaagatcaagcagggagacaggaaagttcttgctaa 391
Query: 607 aggtggaggaaaaaaaaggaaaaagaatatagtcagatatctcaaacc 654
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 390 aggtggaggaaaaaaaaggaaaaagaatatagtcagatatctcgaacc 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_a04.g1 MSMg01no312_a04.g1 CHROMAT_FILE:
MSMg01no312_a04.g1 PHD_FILE: MSMg01no312_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:00 2005
(636 letters)
>mm_chr10_109752513_109753548
Length = 1036
Score = 1185 bits (613), Expect = 0.0
Identities = 631/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 aggacatgggaaatagattca-gggtgtggcccatttgcatgctgctgctgatccagtgg 59
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 200 aggacatgggaaatagattcaggggtgtggcccctttgcatgctgctgctgatccagtgg 259
Query: 60 gtaagcttatacccatgcatatactcacagttctagttatgagtcggagttatataggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtaagcttatacccatgcatatactcacagttctagttatgagtcggagttatataggga 319
Query: 120 gcaggggagaagatatgaagtaaggaagggagtgcagaaagaggttctggggaatgttag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gcaggggagaagatatgaagtaaggaagggagtgcagaaagaggttctggggaatgttag 379
Query: 180 gggatggatatgatcaaaatatgttgttgatatgtacaaaattatcaaacaatatataaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggatggatatgatcaaaatatgttgttgatatgtacaaaattatcaaacaatatataaa 439
Query: 240 ttgttttttattaataattttattctttacatttcaaatgatatccccctttccggatac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 ttgttttttattaataattttattctttacatttcaaatgatatccccctttctggatac 499
Query: 300 ctctccacacatctcccattcactcctctctctccctactcccatttgcctctatgaggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctccacacatctcccattcactcctctctctccctactcccatttgcctctatgaggg 559
Query: 360 tgctcccccatgtatttactcactcctgcctcaccactctgccatccccctatgctgggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgctcccccatgtatttactcactcctgcctcaccactctgccatccccctatgctgggg 619
Query: 420 catcaaaactccacaggaccaagggcttcccctcccattgatgtcagatatgggaaaaga 479
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 620 catcaaaactccacaggaccaagggcctcccctcccattgatgtcagaaatgggaaaaga 679
Query: 480 aactgcaagtactgactgtttaggtatcagatatgttttatctcaaattattccatctgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aactgcaagtactgactgtttaggtatcagatatgttttatctcaaattattccatctgc 739
Query: 540 atacattcagagagacgtgttctgggtgttatagagaactgggtaaaacatcagcattat 599
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atacattcagagagacatgttctgggtgttatagagaactgggtaaaacatcagcattat 799
Query: 600 tgctgttaccatgttttttacaaaacccagttaactc 636
|||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgctgttaccatgttttttacaaaacccagttaactc 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
