Query= MSMg01no312_h10.b1 MSMg01no312_h10.b1 CHROMAT_FILE:
MSMg01no312_h10.b1 PHD_FILE: MSMg01no312_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:33 2005
(317 letters)
>mm_chr10_68022699_68023415
Length = 717
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%)
Strand = Plus / Minus
Query: 5 gaattccatgagccaatggtttagaattatataacattaaagctgaattatactgagaac 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattccgtgagccaatggtttagaattatataacattaaagctgaattatactgagaac 456
Query: 65 aagaaaatatagtgcactcctcgttcctaagtttaagaaagtcttctccccaactgtaca 124
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagaaaatagagtgcactccccgttcctaagtttaagaaagtcttctccccaactgtaca 396
Query: 125 ggagttagctgggtatcttccactccgtggtcacaagtactcataattgtaaaatcagag 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 395 ggagttagctgggtatcttccactccgtggtcacaagtattcataattgtaaaatcagag 336
Query: 185 ctcaaagtgattagttaaacataagcattacatctggaaatctagcaaaaagagattatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctcaaagtgattagttaaacataagcattacatctggaaatctagcaaaaagagattatg 276
Query: 245 tcttgggaagaaaatctatgacatagtccatgtgatgcagcgggaagaagaaatttaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcttgggaagaaaatctatgacatagtccatgtgatgcagcgggaagaagaaatttaaaa 216
Query: 305 cgcaagacagt 315
|| ||||||||
Sbjct: 215 cgtaagacagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_h10.g1 MSMg01no312_h10.g1 CHROMAT_FILE:
MSMg01no312_h10.g1 PHD_FILE: MSMg01no312_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:33 2005
(283 letters)
>mm_chr10_67978622_67979309
Length = 688
Score = 485 bits (251), Expect = e-142
Identities = 276/287 (96%), Gaps = 5/287 (1%)
Strand = Plus / Plus
Query: 2 agtcaccaggcttggtggcaagagcctttactcgctgaaccatctcctgagcctgtgtgt 61
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 202 agtcaccaggcttggtggcaagagcctttactcgctgagccatctcctgagcctgtgtgt 261
Query: 62 tatctgcgaatcgagtggtcactacacagattctagaatcgtctggattacaacaatcta 121
||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 262 tatctgcgaattgagtggtcactgcacaaattctagaatcgtctggattacaacaatcta 321
Query: 122 cg-----ttttttatggatgttgtctagaagacacagaacattacatacatgggatgaga 176
|| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 322 cgtttttttttttatggatgttgtttagaagacatagaacattacatacatgggatgaga 381
Query: 177 acaagtcctacctgatttttaagtaatcgatgatggcgttggcttccttgacttcgaaga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acaagtcctacctgatttttaagtaatcgatgatggcgttggcttccttgacttcgaaga 441
Query: 237 catggaaatcttcactcttctgcgagtggtttggtccgatttctgcc 283
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catggaaatcttcactcttctgcgagtggtttggtccgatttctgcc 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 688
Length adjustment: 9
Effective length of query: 274
Effective length of database: 679
Effective search space: 186046
Effective search space used: 186046
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
