Query= MSMg01no312_m17.b1 MSMg01no312_m17.b1 CHROMAT_FILE:
MSMg01no312_m17.b1 PHD_FILE: MSMg01no312_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:57 2005
(373 letters)
>mm_chr10_114839936_114840708
Length = 773
Score = 714 bits (369), Expect = 0.0
Identities = 372/373 (99%)
Strand = Plus / Minus
Query: 1 cagagatttactctaagtttttacagtattatatacaagtcatcaataaatctcaacttc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 573 cagagatttactctaagtttttacagtattatataaaagtcatcaataaatctcaacttc 514
Query: 61 cttaagacatttctctgaaggttggagtagcttaattgtgattataaaatgtttcaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cttaagacatttctctgaaggttggagtagcttaattgtgattataaaatgtttcaaagt 454
Query: 121 tttggctcctacctggagaactggtttcactatctgtatccatagcaacttcttcgtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttggctcctacctggagaactggtttcactatctgtatccatagcaacttcttcgtagt 394
Query: 181 tatcatactgatatatgcctcctgcactgtcagactgcttttctaaggaccgcctcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tatcatactgatatatgcctcctgcactgtcagactgcttttctaaggaccgcctcaggt 334
Query: 241 caggatctgaagactaagcatacaacaaacatttcttaggctctccttgggctacttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caggatctgaagactaagcatacaacaaacatttcttaggctctccttgggctacttatc 274
Query: 301 ccaagagttgatggctatctttcaggagaaaataccccagatcagaatgtttctatgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccaagagttgatggctatctttcaggagaaaataccccagatcagaatgtttctatgagg 214
Query: 361 tttgcacatggca 373
|||||||||||||
Sbjct: 213 tttgcacatggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_m17.g1 MSMg01no312_m17.g1 CHROMAT_FILE:
MSMg01no312_m17.g1 PHD_FILE: MSMg01no312_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:57 2005
(553 letters)
>mm_chr10_114685104_114686055
Length = 952
Score = 949 bits (491), Expect = 0.0
Identities = 531/553 (96%), Gaps = 15/553 (2%)
Strand = Plus / Plus
Query: 1 agtgcactctattggtattctgtttactcaagcacgctctggctggcaccgcaggatgct 60
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 215 agtgcactctattggtattctgtttactcaagcacgctctggctcgcactgcaggatgct 274
Query: 61 tgggggttggttccgctttggttttcctttccccagtgggacaggcacactgtaatcaca 120
|||||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct: 275 tgggggttggctccgctttggttttcctttcccca--------------ctg-aatcaca 319
Query: 121 tttatattgcacagcaggagagtcacagaaggccacgctgtgggagctaagctcagacta 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 320 tttatattgcacagcaggagagtcacagaaggccacgctgtgggagctaaactcagacta 379
Query: 181 ggttgttgggaggcggggtcctttaagagcggagcaggcttctccctactcccagtgaaa 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 ggttgttgggaggcggggtcctttaagagcggagcaggcttctctctactcccagtgaaa 439
Query: 241 gaaaacactgccacatagcagctcgctaaagcttaattaaaaaaccaaccattgagttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaaacactgccacatagcagctcgctaaagcttaattaaaaaaccaaccattgagttcc 499
Query: 301 cagcattatatacgtcccactctatttcataactatactaccttcatatttgtgtactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagcattatatacgtcccactctatttcataactatactaccttcatatttgtgtactgc 559
Query: 361 cttctgtttctttgcagaaacccattagcatgaataaataactattcaaaaccaatacta 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 560 cttctgtttctttgcagaaacccatcagcatgaataaataactattcaaaaccaatacta 619
Query: 421 cttaacagtagttaaacatctatatttatcaagcacatgcttgacgccaagaattactct 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttaacagtagttaagcatctatatttatcaagcacatgcttgacgccaagaattactct 679
Query: 481 aaatgttttacaaatattaattcatttaacaactccatgctatatttataccactctatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaatgttttacaaatattaattcatttaacaactccatgctatatttataccactctatg 739
Query: 541 aaactgggtaatg 553
|||||||||||||
Sbjct: 740 aaactgggtaatg 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 952
Length adjustment: 10
Effective length of query: 543
Effective length of database: 942
Effective search space: 511506
Effective search space used: 511506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
