Query= MSMg01no313_m01.b1 MSMg01no313_m01.b1 CHROMAT_FILE:
MSMg01no313_m01.b1 PHD_FILE: MSMg01no313_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:49 2005
(292 letters)
>mm_chr10_85610819_85611510
Length = 692
Score = 485 bits (251), Expect = e-141
Identities = 271/282 (96%), Gaps = 8/282 (2%)
Strand = Plus / Plus
Query: 15 ggaattcaccaaccagggtagactagtcggccaatgagctttaggtttctctcgtctcta 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggaattcaccaaccagggtagactagtcggccaatgagctttaggtttctctcgtctcta 274
Query: 75 cccctttacctgggacacgccccgcg----ctatcatgcctgactctttctcttggttct 130
||||||||||||||||| | | | ||||||||||||||||||||||||||||||
Sbjct: 275 cccctttacctgggacatg----gtgggtgctatcatgcctgactctttctcttggttct 330
Query: 131 tatgcatgtgtggcaagcatggtaccaactgagctacctcacaagcatcagagaccattt 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tatgcatgtgtggcaagcatggtaccaactgagctacctcacaagcatcagagaccattt 390
Query: 191 cttttggagcgtctcccttactcagggtggacctgcagagccccagaatgcacatcacct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttttggagcgtctcccttactcagggtggacctgcagagccccagaatgcacatcacct 450
Query: 251 tggtgaggtaggagtgtaaatgatggagtggnggaaccacag 292
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 451 tggtgaggtaggagtgtaaatgatggagtgggggaaccacag 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no313_m01.g1 MSMg01no313_m01.g1 CHROMAT_FILE:
MSMg01no313_m01.g1 PHD_FILE: MSMg01no313_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:49 2005
(390 letters)
>mm_chr10_85775525_85776314
Length = 790
Score = 590 bits (305), Expect = e-173
Identities = 364/391 (93%), Gaps = 13/391 (3%)
Strand = Plus / Minus
Query: 1 cccacctgtttttctcaaccctagagcacagtggggcagaaaatgtgtgaacccccacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 684 cccacctgtttttctcaaccctagagcacagtggggcagaaaatgtgtgaaccaagaaca 625
Query: 61 gggtagccagagtatgggagtgggtagctaag-----a--------ggtagacctcccca 107
|||||||| |||||||||||| |||||||||| | ||||||||||||||
Sbjct: 624 gggtagcctgagtatgggagtcggtagctaagggttcagtctgtggggtagacctcccca 565
Query: 108 ttcagacatccacacccagccttgcgatctagacagatatgtgacatcatccaacctaga 167
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 564 ttcagacatccacacccagccttgcaatctagacagacatgtgacatcatccaacctaga 505
Query: 168 caatgtgatgtcatcagagcccatctccacctttcatgagtatatccaaatgttaaagcc 227
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 504 caatgtgatgtcatcagagcccatctccacctctcatgagtatatccaaatgtaaaagcc 445
Query: 228 aaggttgacctgtgagcctcacttgcccaaggacaagataacttcctggaatgctgggag 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaggttgacctgtgagcctcacttgcccaaggacaagataacttcctggaatgctgggag 385
Query: 288 ctgcggttcttggaaataacaagccacgtgttttcactcccttttgcaagtttgaaccga 347
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 384 ctgcggttcttggaaataacaagccacgtgttttcactcccataagcaagtttgaaccga 325
Query: 348 ctagatcagatgtgcttgactaaatgtaagc 378
|||||||||||||||||||||| ||||||||
Sbjct: 324 ctagatcagatgtgcttgactagatgtaagc 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
