Query= MSMg01no315_a11.b1 MSMg01no315_a11.b1 CHROMAT_FILE:
MSMg01no315_a11.b1 PHD_FILE: MSMg01no315_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:23 2005
(676 letters)
>mm_chr10_98316108_98317183
Length = 1076
Score = 1065 bits (551), Expect = 0.0
Identities = 581/591 (98%), Gaps = 4/591 (0%)
Strand = Plus / Plus
Query: 87 ggacattatttctctccccattacctattttattttacaaagaaaatgaaacagagaaat 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggacattatttctctccccattacctattttattttacaaagaaaatgaaacagagaaat 346
Query: 147 acaattcactacctaggatcaggcaaagctgtcaggagaagttgctttccaatgctattt 206
|||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 347 acaattcactacctaggatcaggcaaggctgtcaggagaagttgcttttcaacgctattt 406
Query: 207 ctataagcgcatttctttctttcccaaatgaatcaccgtgttccagggtaacaattacag 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctataagcgcatttctttctttcccaaatgaatcaccgtgttccagggtaacaattacag 466
Query: 267 ccgccatgccctttgcatcgggaagctgcacccacacaaatcaagccaatattatcagcg 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccgccatgccctttgcatcgggaagctgcacccacacaaatcaagccaatattatcagcg 526
Query: 327 tggagacagccaaatgcttctgtgcttggacccttctttcaaggaagaaca-catatcct 385
||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||
Sbjct: 527 tggagacagccaaatgcctctgtgcttggacccttctttcaaggaagaatagc-tatcct 585
Query: 386 gcacgattccatctttcaacataagagtacctagtaacattcattgttaattcacttatc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gcacgattccatctttcaacataagagtacctagtaacattcattgttaattcacttatc 645
Query: 446 atgcttgccctggtcaaaagctgcaacag-aaacctgacctatgcttgcaggttattgcc 504
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 646 atgcttgccctggtcaaaagctgcaa-aggaaacctgacctatgcttgcaggttattgcc 704
Query: 505 tacaaagtctctaaaactggtaaactgtaacaataacccacatgactataaggtttccca 564
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 705 tacaaagtctctaaaactggtaaactggaacaataacccacatgactataaggtttccca 764
Query: 565 aagccccagaaaggaataacacctagaatcaggaatgttttactgaataaaaaaggaacc 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aagccccagaaaggaataacacctagaatcaggaatgttttactgaataaaaaaggaacc 824
Query: 625 aaaatgacaatattaacctattaggagctttggttatactttttagaaatt 675
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 aaaatgacaatattaacctattaggagctttggttatactttttagaaatt 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_a11.g1 MSMg01no315_a11.g1 CHROMAT_FILE:
MSMg01no315_a11.g1 PHD_FILE: MSMg01no315_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:23 2005
(639 letters)
>mm_chr10_98319601_98320639
Length = 1039
Score = 1089 bits (563), Expect = 0.0
Identities = 624/651 (95%), Gaps = 13/651 (1%)
Strand = Plus / Minus
Query: 1 tctgccct-tacatctagatgggcaagagaaggcttaagaag-----------gctcagg 48
|||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct: 891 tctgccctct-catctagatgggcaagagaaggcttaagaaggcaggaggggtgctcagg 833
Query: 49 caaaaccaggcaaggaaccttggtagttgctgggctcccgttgcttccaggccttctctg 108
|||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||
Sbjct: 832 caaaaccaggcaaggaactttggtggttgctgggctcctgttgcttccaggccttctgtg 773
Query: 109 cacctactgccaatttttctgtgtgagacgctcacttactttatctgtcaacagctggaa 168
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 772 cacctactgccaattcttctgtgtgagacgctcacttactttatctgtcaacagctggga 713
Query: 169 gtgttggttcctgaggcaaacagctgatttcctccccagaaatcaccctctttctctggc 228
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 712 gtgttggttcctgaggcaaacagctgatttcctctccagaaatcaccctgtttctctggc 653
Query: 229 cattgtcctttgccaaagggagtctccttgtgtaagtccgtgcttcctccccagggacag 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cattgtcctttgccaaagggagtctccttgtgtaagtccgtgcttcctccccagggacag 593
Query: 289 cttgcattcagtgactgatggctgttagtactgaggacaactcaaacaaccaaacttctg 348
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 592 cttgcattcagtgactgatggctgttagtactgaggacaactcaaagaaccaaacttctg 533
Query: 349 gcctaaattcagaattccttaagggctgtgccagctccggagttctctaggaattcatga 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gcctaaattcagaattccttaagggctgtgccagctccggagttctctaggaattcatga 473
Query: 409 aggtctttgtttccattgcttcacagttggatttcaacatctgaccagcagtggtttctt 468
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aggcctttgtttccattgcttcacagttggatttcaacatctgaccagcagtggtttctt 413
Query: 469 agtcctttgtaggcaggtatttgtctggtcaattccctaaaaggtaactgcaagcaatca 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agtcctttgtaggcaggtatttgtctggtcaattccctaaaaggtaactgcaagcaatca 353
Query: 529 gcatttaaatttgcttcctagggacttggagtatggtagttagggccaccggtgaactga 588
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 352 gcatttaaatttgcttcctagggacttggagtatggtagttagggccaccagtgaactga 293
Query: 589 agaaggcagttctaggtggaagtgggccattcactggtcagctgtctatga 639
||||| ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 292 agaagacagttataggtggaagtgggtcattcactggtcagctgtctatga 242
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
