Query= MSMg01no315_c08.b1 MSMg01no315_c08.b1 CHROMAT_FILE:
MSMg01no315_c08.b1 PHD_FILE: MSMg01no315_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:32 2005
(448 letters)
>mm_chr10_116630441_116631288
Length = 848
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%)
Strand = Plus / Minus
Query: 1 tgttaaccatataattttaatctgacataagaagcagactacagatttttggtttattgc 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 316 tgttaaccatataactttaatctgacataagaagcagactacagatttttggcttattgc 257
Query: 61 taagctaactagaacggtatcacacacactgaaaaggaagaggctgtaaggcgtggggtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 256 taagctaactagaacggtatcacacacactgaaaaggaagaggctgtaagacgtggggtt 197
Query: 121 ctcaacctgtgggtcgcgacccctagggactgaatgaccctttttacaggggttgcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctcaacctgtgggtcgcgacccctagggactgaatgaccctttttacaggggttgcctaa 137
Query: 181 gaccataggaaaacacagagatttatatcatgactcatgacagtagcaaaactgcagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gaccataggaaaacacagagatttatatcatgactcatgacagtagcaaaactgcagtta 77
Query: 241 tgaagtagcaataaaaataattttatggttttgggtcagcacagcatgaggaaacgcatt 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||
Sbjct: 76 tgaagtagcaataaaaataattttatggtttggggtcagcacagcatgaggaaatgtatt 17
Query: 301 aaaaggtca 309
|||||||||
Sbjct: 16 aaaaggtca 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_c08.g1 MSMg01no315_c08.g1 CHROMAT_FILE:
MSMg01no315_c08.g1 PHD_FILE: MSMg01no315_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:32 2005
(655 letters)
>mm_chr10_116574883_116575937
Length = 1055
Score = 1251 bits (647), Expect = 0.0
Identities = 653/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 1 caggacagtcaaggctatgaaaagaaaccatgtctc-aaaaaaaaacaaacaaaaggaaa 59
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 200 caggacagtcaaggctatgaaaagaaaccatgtctcaaaaaaaaaacaaacaaaaggaaa 259
Query: 60 cgatttaaagaaaaaatggggaaggagaggggaggaaggagggaagaaaaagaaaacttc 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgatttaaagaaaaaatggggaaggagaggggaggaaggagggaagaaaaagaaaacttc 319
Query: 120 ttttctatgaattcattttatatgcaatcactagcacggctcttgaaacctagtgccctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttttctatgaattcattttatatgcaatcactagcacggctcttgaaacctagtgccctt 379
Query: 180 caagagctacttactgcacccatcagtagatggactcatggtctaacttgttcattaccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caagagctacttactgcacccatcagtagatggactcatggtctaacttgttcattaccc 439
Query: 240 aagtccttctagcactaactcaggataaaaggtagaggtggcacagccctataatcttag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagtccttctagcactaactcaggataaaaggtagaggtggcacagccctataatcttag 499
Query: 300 tcaaaaggatcaaactatcagtgctacagtgggagacagaaatcccgagaaagaaaaagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaaaaggatcaaactatcagtgctacagtgggagacagaaatcccgagaaagaaaaagg 559
Query: 360 atgaatctggttaagagcccagcttctactaattcactggcccaaaggaaaaatactaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgaatctggttaagagcccagcttctactaattcactggcccaaaggaaaaatactaac 619
Query: 420 cagcattacaccctgatagcaacatgatatcaatataataagccaactcctctgcttatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagcattacaccctgatagcaacatgatatcaatataataagccaactcctctgcttatc 679
Query: 480 caaaccttttagttttatttacttggttttatgtgtacgggtgttttgcttgcatgtatg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caaaccttttagttttatttacttggttttatgtgtacgggtgttttgcttgcatgtatg 739
Query: 540 tatgcctgcaatgcttggtgcctgtggaattcagaagaagctattagacccctgaagtta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tatgcctgcaatgcttggtgcctgtggaattcagaagaagctattagacccctgaagtta 799
Query: 600 cacggacagttgtcagtcaccatgtaagagctagggatcaaacctgggtctctgc 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cacggacagttgtcagtcaccatgtaagagctagggatcaaacctgggtctctgc 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
