Query= MSMg01no316_h19.b1 MSMg01no316_h19.b1 CHROMAT_FILE:
MSMg01no316_h19.b1 PHD_FILE: MSMg01no316_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:15 2005
(678 letters)
>mm_chr10_114251210_114252286
Length = 1077
Score = 1234 bits (638), Expect = 0.0
Identities = 668/678 (98%), Gaps = 1/678 (0%)
Strand = Plus / Plus
Query: 1 cacagtgtataacattggtcctagaattgaaagcatcccccatagatacagacagatgtc 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 201 cacagtgtataacattggtcctagaattgaaagcatcccccatagaaacagagagatgtc 260
Query: 61 tgtatcaagtctttcctcagtatatgttgaatggattaacattccattcaatgtgcttgg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatcaagtctttcctcggtatatgttgaatggattaacattccattcaatgtgcttgg 320
Query: 121 ctttgactttttcttctctaatctaagtctcatgtcttcctactggcccagcatatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ctttgactttttcttctctaatctaagtctcatgtcttcctactggcccagcacatttgg 380
Query: 181 gggtctatgtgctttgtaggcatgctcttggctcctgataattgctagcaaaacatttct 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gg-tctatgtgctttgtaggcatgctcttggctcctgataattgctagcaaaacatttct 439
Query: 241 tttttatttgtcataaaccagactctactttttgggtctaagcttaaaaacattgtgcca 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttttatttgtcaaaaaccagactctactttttgggtctaagcttaaaaacattgtgcca 499
Query: 301 cggtgttaattgaaagcatttatttgtctttttttaaagatgtgaacaaataaaaagtat 360
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 500 cagtgttaattgaaagcatttatttgtctttttttaaagatatgaacaaataaaaagtat 559
Query: 361 accattttcccttgaataaaccaataggctaagaattattatctgatcctttcattttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accattttcccttgaataaaccaataggctaagaattattatctgatcctttcattttca 619
Query: 421 gttctggaaaccaaaataattatttttcagcaatgggggataatttgactatatgttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttctggaaaccaaaataattatttttcagcaatgggggataatttgactatatgttgag 679
Query: 481 acaatttaaatcattccctagagacatacttcacagaatgttggattctgatgtgcacgt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 acaatttaaatcattccctagagacatacttcacagaatgttggattctgatgtacacgt 739
Query: 541 gtaaaaggagcagcacatatgctcaaatctgccctaaaatatgctagcaggctcacgaaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 740 gtaaaaggagcagcacatatgctcaaatctgccctaaaatatgctagcaggctcacaaaa 799
Query: 601 tgcagaaaatcacaaatttgtgtattccttttcacatgtcagtgtgtatacacaggcagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgcagaaaatcacaaatttgtgtattccttttcacatgtcagtgtgtatacacaggcagg 859
Query: 661 tataaagtggctacagaa 678
||||||||||||||||||
Sbjct: 860 tataaagtggctacagaa 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1077
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1067
Effective search space: 712756
Effective search space used: 712756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_h19.g1 MSMg01no316_h19.g1 CHROMAT_FILE:
MSMg01no316_h19.g1 PHD_FILE: MSMg01no316_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:15 2005
(680 letters)
>mm_chr10_114444652_114445731
Length = 1080
Score = 1120 bits (579), Expect = 0.0
Identities = 585/587 (99%)
Strand = Plus / Minus
Query: 94 aattctttgtttagctccgtaccccatttttaaaaaatagggttatttggttttctggag 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 aattctttgtttagctccgtaccccatttttaaaaaatagggttatttggttttctggag 1021
Query: 154 tctaactttttagttttttgtatacattggatattagccccctattggatttaggattgg 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tctaactttttagttttttgtatacattggatattagccccctattggatttaggattgg 961
Query: 214 taaaggtcttttcccaatctgttggttgcctttttgtcttattgacagtgttctttgcct 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 taaaggtcttttcccaatctgttggttgcctttttgtcttattgacagtgttctttgcct 901
Query: 274 tacagaagctttgaaacttctctatgactgatggatgatataatctaattggcagaattt 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tacagaagctttgaaacttctctatgactgatggatgatataatctaattggcagaattt 841
Query: 334 aaattttcttaacggcgtatatataacgttctgtcttatagttgctaccttcctagccat 393
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 aaattttcttaatggtgtatatataacgttctgtcttatagttgctaccttcctagccat 781
Query: 394 ggatgtgtggtagcactagaaaattgaggaagctgtactgccattccaattcagtgtgct 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggatgtgtggtagcactagaaaattgaggaagctgtactgccattccaattcagtgtgct 721
Query: 454 aacagtgatttcaggttaaggcacaaaatcctgtattcctgtgagttgatctcagtgcca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aacagtgatttcaggttaaggcacaaaatcctgtattcctgtgagttgatctcagtgcca 661
Query: 514 gctcctatacacttcccatttgtatctcaccagctggcttaaagattcatctttacatca 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gctcctatacacttcccatttgtatctcaccagctggcttaaagattcatctttacatca 601
Query: 574 tatcaggcagatcaagtgcctcatttggcattcagtagatgaactagaaatctcttatcc 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tatcaggcagatcaagtgcctcatttggcattcagtagatgaactagaaatctcttatcc 541
Query: 634 cagtggagggaacagtgttttaattgaatagaaaacaatattaagga 680
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cagtggagggaacagtgttttaattgaatagaaaacaatattaagga 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
