Query= MSMg01no316_o13.b1 MSMg01no316_o13.b1 CHROMAT_FILE:
MSMg01no316_o13.b1 PHD_FILE: MSMg01no316_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:47 2005
(697 letters)
>mm_chr10_8765846_8766941
Length = 1096
Score = 1323 bits (684), Expect = 0.0
Identities = 690/692 (99%), Gaps = 1/692 (0%)
Strand = Plus / Plus
Query: 5 gaattcttataagaagacaattctcaggcactcaaagggggaagactatatgtcaacgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttataagaagacaattctcaggcactcaaagggggaagactatatgtcaacgtg 264
Query: 65 ggcagaatgtccccttcaaccgaaggcaacctagagctaggagaaaggtgtggaggacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcagaatgtccccttcaaccgaaggcaacctagagctaggagaaaggtgtggaggacct 324
Query: 125 ccctcatagttctcagaagatagcaagggtttcgatctctgagctctagcagtgtgagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccctcatagttctcagaagatagcaagggtttcgatctctgagctctagcagtgtgagac 384
Query: 185 caggaatgtctgtgtccaaggcacccagcatgtgatccttggctttacagcctagcaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggaatgtctgtgtccaaggcacccagcatgtgatccttggctttacagcctagcaaac 444
Query: 245 taatgtggaggtggtcaaggaactcaaaaggagccaatgagaactcaggctgggactttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatgtggaggtggtcaaggaactcaaaaggagccaatgagaactcaggctgggactttc 504
Query: 305 aatgaagcaattggaaaagtgacgatctcaggttttttgttttctctttctttttcttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgaagcaattggaaaagtgacgatctcaggttttttgttttctctttctttttcttct 564
Query: 365 agatatggcaaaaaaagaatgtaacccccagggcttctacatagaccaaacctgttagag 424
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agatatgg-aaaataagaatgtaacccccagggcttctacatagaccaaacctgttagag 623
Query: 425 gtagagacagaacggggagacagagactgagcaagatggggtcctagtgacatgttggag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtagagacagaacggggagacagagactgagcaagatggggtcctagtgacatgttggag 683
Query: 485 ccatgagtttaaagcattttcaagtagcttccagattttgaactgtctatgatattggac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccatgagtttaaagcattttcaagtagcttccagattttgaactgtctatgatattggac 743
Query: 545 agtaaagtctctgcttttgcttccttcgagttaagagatcctctcagtcctccaaagatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agtaaagtctctgcttttgcttccttcgagttaagagatcctctcagtcctccaaagatc 803
Query: 605 cctatagaaagttcttaatcaacttgggaactgatcagaaggttgactgtgaactccagc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cctatagaaagttcttaatcaacttgggaactgatcagaaggttgactgtgaactccagc 863
Query: 665 tggtgcctattacggagtgaatgtggcagcca 696
||||||||||||||||||||||||||||||||
Sbjct: 864 tggtgcctattacggagtgaatgtggcagcca 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1096
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1086
Effective search space: 746082
Effective search space used: 746082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_o13.g1 MSMg01no316_o13.g1 CHROMAT_FILE:
MSMg01no316_o13.g1 PHD_FILE: MSMg01no316_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:47 2005
(668 letters)
>mm_chr10_8814297_8815364
Length = 1068
Score = 1000 bits (517), Expect = 0.0
Identities = 526/529 (99%)
Strand = Plus / Minus
Query: 1 agaaatggaaacagcccacgattgaaaatggtgttcactttatgcaaaggagttttgagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 529 agaaatggaaacagcccacgattgaaaatggtgttcactttatgcaaaggagtttttagt 470
Query: 61 aaatgatgcaagacagggaaaatgtcaaccgttgctgaagctcggggatgactaaatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aaatgatgcaagacagggaaaatgtcaaccgttgctgaagctcggggatgactaaatgga 410
Query: 121 aattcgccgcttaatgaattgttcattgcataatgattcttccaagtttgtgcatatttg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 409 aattcgccgcttaatgaattgttcattacataatgattcttccaagtttgtgcatatttg 350
Query: 181 aaaattccctaaagaaaacaagaaatatgcagatggttggcaagacctgggtaggtaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaaattccctaaagaaaacaagaaatatgcagatggttggcaagacctgggtaggtaaga 290
Query: 241 cctctatgtccaagtaatcgtttctgacacccaaagtaagagaagagagataaaactgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 cctctatgtccaagtaatcgtttctgacacccaaagtaagagaagagagataaaactgag 230
Query: 301 actcaaaagaaaatatcagatcaaggtggcctggaatttctgctactggggagactgagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 actcaaaagaaaatatcagatcaaggtggcctggaatttctgctactggggagactgagg 170
Query: 361 cagaagtatcacaagctggaagctagcctgggctactgaggagatgctactcaggtgatg 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 169 cagaagtatcacaagctggaaactagcctgggctactgaggagatgctactcaggtgatg 110
Query: 421 tcaagtctacctggagctatagagtgatttcaagtctaccctgagttacagagtgaattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tcaagtctacctggagctatagagtgatttcaagtctaccctgagttacagagtgaattc 50
Query: 481 aaagccagcctggactacagaatgaatttaagaccaaaagaagcaactt 529
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 aaagccagcctggactacagaatgaatttaagaccaaaagaagcaactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
