Query= MSMg01no317_a24.b1 MSMg01no317_a24.b1 CHROMAT_FILE:
MSMg01no317_a24.b1 PHD_FILE: MSMg01no317_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:59 2005
(677 letters)
>mm_chr10_67495714_67496789
Length = 1076
Score = 1007 bits (521), Expect = 0.0
Identities = 530/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Minus
Query: 3 gaattcaagtggggtggccgggttaaagaaatattcttagcctttgactattttcactta 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gaattcaagtgggg-gggggggttaaagaaatattcttagcctttgactattttcactta 474
Query: 63 atttcacttcaacacgaatttctgattactcttgtagacaggcttaaacagattcaacta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atttcacttcaacacgaatttctgattactcttgtagacaggcttaaacagattcaacta 414
Query: 123 ttaaataaagacaatggcattctttgcacagaagtgtttatatatctaagagttattgtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttaaataaagacaatggcattctttgcacagaagtgtttatatatctaagagttattgtt 354
Query: 183 tctaatgaagcgacttgaagcagagaatgatgaagcagaccatttatctctcaagtaaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tctaatgaagcgacttgaagcagagaatgatgaagcagaccatttatctctcaagtaaat 294
Query: 243 tcaggtcaacaatataggttaatattacatcctctattaactacagtacccataggcact 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcaggtcaacaatataggttaatattacatcctctattaactacagtacccataggcact 234
Query: 303 gttacagatttaaaaaatcccaaggtagggattttgtttattttgagagagggtctcact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gttacagatttaaaaaatcccaaggtagggattttgtttattttgagagagggtctcact 174
Query: 363 atgtagatctggctgacctgaactcattatgtagaacaggctggatgtgaactcagagat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgtagatctggctgacctgaactcattatgtagaacaggctggatgtgaactcagagat 114
Query: 423 ctgcctgcctctgcctcacgagaaatggcatatgtcaaatacttttgcatgctggtttgt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ctgcctgcctctgcctcacgagaaatggcatatgtcaaatacttttgcatgctggtttgt 54
Query: 483 ttgtttgcttgcttgcttttttttaaacaagtgaaaattaaatgcagagttta 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ttgtttgcttgcttgcttttttttaaacaagtgaaaattaaatgcagagttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1076
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1066
Effective search space: 711022
Effective search space used: 711022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_a24.g1 MSMg01no317_a24.g1 CHROMAT_FILE:
MSMg01no317_a24.g1 PHD_FILE: MSMg01no317_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:00 2005
(613 letters)
>mm_chr10_67317802_67318813
Length = 1012
Score = 1089 bits (563), Expect = 0.0
Identities = 598/613 (97%), Gaps = 8/613 (1%)
Strand = Plus / Plus
Query: 1 tcttgatcacaaaagggaagttacagggggtgtctgtgtagcagacaaccttgaatctgc 60
|||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 208 tcttgatcacaaaagggaagttac------t-tctgtgtagcagacaacattgaatctgc 260
Query: 61 tctatgtatgtggggtcagatggggtgaggtgctgttctagatctggtgttactcagata 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctatgtatgtggggtgagatggggtgaggtgctgttctagatctggtgttactcagata 320
Query: 121 gtcactagtcttggttgggggggagatggttgggggaaagaggaagttaggagctgagga 180
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacactagtcttggttgagggggagatggttgggggaaagaggaagttaggagctgagga 380
Query: 181 gctgggagccagctttcgtgaggcaaaaggtatttctggaagattgtacctaaggaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgggagccagctttcgtgaggcaaaaggtatttctggaagattgtacctaaggaaagc 440
Query: 241 gccaatggaattacttagatgttgatttttttaagcagcaaaacaaaatcaattgcttca 300
|||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 441 gccaatgggattacttagatgttgaattttt-aagcagcaaaacaaaatcaattgcttca 499
Query: 301 agcttctataggtagtaggtaagaaaacagatccgtcttttcagtcctggcaatgttaac 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcttctataggtagtaggtaagaaaacagatccgtcttttcagtcctggcaatgttaag 559
Query: 361 gtatgcctgtgatcacaccatccaccgccatgcgaacacctttaaacatcccctggattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtatgcctgtgatcacaccatccaccgccatgcgaacacctttaaacatcccctggattc 619
Query: 421 cacagttaattaaagagcgcagtcctattgctcatttcatctggtctatagctatgagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cacagttaattaaagagcgcagtcctattgctcatttcatctggtctatagctatgagtc 679
Query: 481 aatgtatggagtttacacgccagcttgggttaatcttcgagccttcattttagcagggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatgtatggagtttacacgccagcttgggttaatcttcgagccttcattttagcagggaa 739
Query: 541 aattttccagtttctcttcctgcttggggtcctagctctttaaattctatccttattggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aattttccagtttctcttcctgcttggggtcctagctctttaaattctatccttattggc 799
Query: 601 aagctgttgtcat 613
|||||||||||||
Sbjct: 800 aagctgttgtcat 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1012
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1002
Effective search space: 604206
Effective search space used: 604206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
