Query= MSMg01no317_d19.b1 MSMg01no317_d19.b1 CHROMAT_FILE:
MSMg01no317_d19.b1 PHD_FILE: MSMg01no317_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:13 2005
(687 letters)
>mm_chr10_37438851_37439937
Length = 1087
Score = 1156 bits (598), Expect = 0.0
Identities = 640/654 (97%)
Strand = Plus / Minus
Query: 4 ggaattcctccttatgccaattcggcatccccagcgtcatgaccccagccaatgatgtgc 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ggaattcctccttatgtaaattcggcatccccagcgtcatgaccccagccaatgatgtgc 910
Query: 64 actcaactctatacccccgactcaccccacaaaggtataaatagctattgtttcacagca 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 actcaactctatagccccgactcaccccacaaaggtataaatagctattgtttcacagca 850
Query: 124 ataacctgaaccagttctctgaagttgttgccagtaggtgtgtattctttacccatgcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ataacctgaaccagttctctgaagttgttgccagtaggtgtgtattctttacccatgcac 790
Query: 184 tcacctcaccactgaccaagatcctgcctgcacccagcagcctggctaaacttatttcct 243
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tcacctcaccactgacaaagatcctgcctgcacccagcagcctggctaaacttatttcct 730
Query: 244 gccagtccacccaatggagaagcagacacagggtagcatctgaccatttctttaccgttt 303
|||||||||||| | ||||||| |||||||||||||||| |||||||||||||||| |||
Sbjct: 729 gccagtccaccccagggagaagtagacacagggtagcatatgaccatttctttaccattt 670
Query: 304 ccaacaatattgtatatccatcaagataaggggtatcatctccaaaaaagcaaaaatact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ccaacaatattgtatatccatcaagataaggggtatcatctccaaaaaagcaaaaatact 610
Query: 364 caggatactccaaagtgataatttccataagtggatacatagcatatctttggcactgca 423
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 609 caggatactctaaagtgatagtttccataagtggatacatagcatatctttggcactgca 550
Query: 424 aattcatcaggagggagcacaattatggagaaaaagtggatcatgaggaaaggtggacaa 483
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aattcatcaggaggcagcacaattatggagaaaaagtggatcatgaggaaaggtggacaa 490
Query: 484 agtgatctaacactctagggacaataaatatgggttaacaaagtgcataaatgagtgaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 agtgatctaacactctagggacaataaatatgggttaacaaagtgcataaatgagtgaat 430
Query: 544 ggcccaaatatttgctcactgtaattattcctttaggcaatgatattacatttcttggga 603
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 ggcccaaatatttgctcactgtaattattcctttaggcaatgatattaaatttcttggga 370
Query: 604 gatatgaaaaaaacatcaattcaccccagatagaacaccaatgagaaacaagaa 657
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gatgtgaaaaaaacatcaattcaccccagatagaacaccaatgagaaacaagaa 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_d19.g1 MSMg01no317_d19.g1 CHROMAT_FILE:
MSMg01no317_d19.g1 PHD_FILE: MSMg01no317_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:13 2005
(288 letters)
>mm_chr10_37257423_37258109
Length = 687
Score = 487 bits (252), Expect = e-142
Identities = 276/284 (97%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 agaggatttctctgcctcgtggataccagaatgatgaggtttttacctgaagaaaaatat 60
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agaggatttctctgcctcatggataccagaatgatgaggtttttaaatgaagaaaaatat 260
Query: 61 ggcatggaaaagatgaatggaagtacatgaagaagtatgaagtgagaagccaactgggag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtatggaaaagatgaatggaagtacatgaagaagtatgaagtgagaagccaactgggag 320
Query: 121 gagcattcaatagggcatttgaactgaaagccaaccagaaaatgtgcagatagagacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 321 gagcattcaatagggcatttgaactgaaagccaaccagaaaatgtgcagatggagac-ga 379
Query: 181 gctcattgtgctgccacttgagagaataatggagcaaacatcacaaacaggtcagaattg 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 gctcattgtgctgccacttgagagaataatggagcaaagatcacaaacaggtcagaattg 439
Query: 241 tattgttggacaccagaaagatactggcaactactacatttcag 284
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 tattgttggacaccagaaagatactggcaactactatatttcag 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
