Query= MSMg01no318_d05.b1 MSMg01no318_d05.b1 CHROMAT_FILE:
MSMg01no318_d05.b1 PHD_FILE: MSMg01no318_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:20 2005
(223 letters)
>mm_chr10_8028018_8028637
Length = 620
Score = 379 bits (196), Expect = e-110
Identities = 216/224 (96%), Gaps = 5/224 (2%)
Strand = Plus / Plus
Query: 1 agaaagcactttatgttactgtaggctgagctttatgcgacatgccatacagaaaacgtt 60
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 agaaagcactttatgttcctgtaggctgagctttatgcaacatgccatacagaaaacgtt 260
Query: 61 tagtgaaatgagttagaaattccaggcattctcagacccccccctgacatcctgaatttc 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 261 tagtgaaatgagttagaaattccaggcattctcagacccccc--tgacatcctgaattcc 318
Query: 121 ttcactagaatttccaattggccctaccaaaatggacattgtgatctttt-aaaaaaatt 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 ttcactagaatttccaattggccctaccaaaatggacattgtgatctttttaaaaaaatt 378
Query: 180 tttttaaggcattttgagactgttactgtagatgaacatcagag 223
||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttt--aaggcattttgagactgttactgtagatgaacatcagag 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 620
Length adjustment: 9
Effective length of query: 214
Effective length of database: 611
Effective search space: 130754
Effective search space used: 130754
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_d05.g1 MSMg01no318_d05.g1 CHROMAT_FILE:
MSMg01no318_d05.g1 PHD_FILE: MSMg01no318_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:20 2005
(290 letters)
>mm_chr10_8204508_8205197
Length = 690
Score = 520 bits (269), Expect = e-152
Identities = 285/293 (97%), Gaps = 6/293 (2%)
Strand = Plus / Minus
Query: 1 tattttttgccaaggggttgatattttactgacaattgattacaaagtcct---cgccct 57
||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 447 tattttttgccaaggggttgatattttactgaccattgattacaaagtcctgtaag---t 391
Query: 58 tactagaactccagtcttactgatggacaaggtgaggcttaaagctgttaaagaatttgc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tactagaactccagtcttactgatggacaaggtgaggcttaaagctgttaaagaatttgc 331
Query: 118 tgagtaaatgaagctgtgggatcgagccttggaagtgttacttgagaaaatgaacttttg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgagtaaatgaagctgtgggatcgagccttggaagtgttacttgagaaaatgaacttttg 271
Query: 178 cttaattcattgtcagtccgtaggagagaggaggttttgatgcctaattatagatgaatt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cttaattcattgtcagtccgtaggagagaggaggttttgatgcctaattatagatgaatt 211
Query: 238 ttgagtatggaaataatttttattatgtatttatttattgattgattcacata 290
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttgagtatggaaataatttttattatgtatttatttattgattgattcacata 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
